Chlorine in PDB 5ukn: Structure of Unliganded Anti-GP120 CD4BS Antibody DH522UCA Fab

The structure of Structure of Unliganded Anti-GP120 CD4BS Antibody DH522UCA Fab, PDB code: 5ukn was solved by N.I.Nicely, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.00 / 1.75
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	68.524, 68.524, 178.381, 90.00, 90.00, 120.00
R / Rfree (%)	16.7 / 20.2

The binding sites of Chlorine atom in the Structure of Unliganded Anti-GP120 CD4BS Antibody DH522UCA Fab (pdb code 5ukn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Unliganded Anti-GP120 CD4BS Antibody DH522UCA Fab, PDB code: 5ukn:

Chlorine binding site 1 out of 1 in the Structure of Unliganded Anti-GP120 CD4BS Antibody DH522UCA Fab


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Unliganded Anti-GP120 CD4BS Antibody DH522UCA Fab within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl301 b:35.9 occ:1.00 OG H:SER130 3.1 31.6 0.4 O H:HOH413 3.1 34.4 1.0 NE H:ARG129 3.1 31.2 1.0 N L:LEU117 3.2 22.5 1.0 OG H:SER127 3.5 37.2 1.0 CG2 L:THR116 3.5 29.7 1.0 CA L:THR116 3.6 24.6 1.0 O L:LEU117 3.7 24.1 1.0 CG H:ARG129 3.7 31.4 1.0 OG H:SER130 3.8 32.6 0.6 O L:HOH347 3.8 33.0 1.0 NH2 H:ARG129 3.8 31.0 1.0 CB H:SER130 3.9 33.1 0.4 C L:THR116 3.9 24.1 1.0 CZ H:ARG129 3.9 35.9 1.0 CB H:SER130 4.0 32.2 0.6 CD H:ARG129 4.0 31.0 1.0 CB L:THR116 4.1 29.2 1.0 CB H:SER127 4.3 37.0 1.0 CA L:LEU117 4.3 21.1 1.0 C L:LEU117 4.3 21.7 1.0 O L:VAL115 4.4 27.6 1.0 N H:SER130 4.6 32.5 0.4 N H:SER130 4.6 32.4 0.6 OG1 L:THR116 4.7 29.8 1.0 N L:THR116 4.8 24.8 1.0 CB L:LEU117 4.9 26.4 1.0 CA H:SER130 4.9 35.8 0.4 CA H:SER130 4.9 36.1 0.6 NZ L:LYS204 5.0 37.8 1.0

W.B.Williams, J.Zhang, C.Jiang, N.I.Nicely, D.Fera, K.Luo, M.A.Moody, H.X.Liao, S.M.Alam, T.B.Kepler, A.Ramesh, K.Wiehe, J.A.Holland, T.Bradley, N.Vandergrift, K.O.Saunders, R.Parks, A.Foulger, S.M.Xia, M.Bonsignori, D.C.Montefiori, M.Louder, A.Eaton, S.Santra, R.Scearce, L.Sutherland, A.Newman, H.Bouton-Verville, C.Bowman, H.Bomze, F.Gao, D.J.Marshall, J.F.Whitesides, X.Nie, G.Kelsoe, S.G.Reed, C.B.Fox, K.Clary, M.Koutsoukos, D.Franco, J.R.Mascola, S.C.Harrison, B.F.Haynes, L.Verkoczy. Initiation of Hiv Neutralizing B Cell Lineages with Sequential Envelope Immunizations. Nat Commun V. 8 1732 2017.
ISSN: ESSN 2041-1723
PubMed: 29170366
DOI: 10.1038/S41467-017-01336-3