Chlorine in PDB 5ulx: Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp

Enzymatic activity of Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp

All present enzymatic activity of Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp:
2.7.7.7;

Protein crystallography data

The structure of Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp, PDB code: 5ulx was solved by R.Jain, A.K.Aggarwal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.96 / 1.96
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 97.915, 97.915, 202.239, 90.00, 90.00, 120.00
R / Rfree (%) 21.6 / 23.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp (pdb code 5ulx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp, PDB code: 5ulx:

Chlorine binding site 1 out of 1 in 5ulx

Go back to Chlorine Binding Sites List in 5ulx
Chlorine binding site 1 out of 1 in the Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Human Dna Polymerase Iota Bound to Template 1-Methyl- Deoxyadenosine Crystallized in the Presence of Dctp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:85.5
occ:1.00
 ND2 A:ASN290 2.4 70.6 1.0
NZ A:LYS283 3.3 81.1 1.0
CG A:ASN290 3.3 56.6 1.0
OD1 A:ASN290 3.6 51.7 1.0
O A:HOH722 3.7 39.1 1.0
CE A:LYS283 4.3 73.9 1.0
CD A:LYS283 4.3 57.9 1.0
O A:HOH769 4.4 51.1 1.0
CB A:ASN290 4.7 36.6 1.0

Reference:

R.Jain, J.R.Choudhury, A.Buku, R.E.Johnson, L.Prakash, S.Prakash, A.K.Aggarwal. Mechanism of Error-Free Dna Synthesis Across N1-Methyl-Deoxyadenosine By Human Dna Polymerase-Iota. Sci Rep V. 7 43904 2017.
ISSN: ESSN 2045-2322
PubMed: 28272441
DOI: 10.1038/SREP43904
Page generated: Sat Dec 12 12:31:33 2020

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