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Chlorine in PDB 5uwr: Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1

Protein crystallography data

The structure of Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1, PDB code: 5uwr was solved by H.Y.J.Fung, Y.M.Chook, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.44 / 2.24
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 106.085, 106.085, 304.551, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 22.2

Other elements in 5uwr:

The structure of Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1 (pdb code 5uwr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1, PDB code: 5uwr:

Chlorine binding site 1 out of 1 in 5uwr

Go back to Chlorine Binding Sites List in 5uwr
Chlorine binding site 1 out of 1 in the Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of CDC7 Nes Peptide (Extended) in Complex with CRM1- Ran-RANBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1103

b:52.9
occ:1.00
HD21 C:ASN434 2.5 49.5 1.0
H C:GLU355 2.6 26.2 1.0
HA C:ARG356 3.0 32.1 1.0
HA C:GLU354 3.2 33.2 1.0
HB2 C:PHE359 3.3 26.0 1.0
N C:GLU355 3.3 21.8 1.0
ND2 C:ASN434 3.4 41.2 1.0
C C:GLU355 3.6 23.9 1.0
N C:ARG356 3.6 25.2 1.0
CA C:ARG356 3.7 26.8 1.0
HD22 C:ASN434 3.8 49.5 1.0
HB3 C:PHE359 3.8 26.0 1.0
O C:GLU355 3.9 19.4 1.0
O C:ILE353 3.9 18.6 1.0
CB C:PHE359 3.9 21.6 1.0
H C:ARG356 4.0 30.3 1.0
CA C:GLU354 4.1 27.6 1.0
CA C:GLU355 4.1 22.9 1.0
C C:GLU354 4.1 29.0 1.0
O C:HOH1404 4.2 37.9 1.0
HB2 C:ARG356 4.2 38.5 1.0
CG C:ASN434 4.3 42.6 1.0
CG C:PHE359 4.3 18.7 1.0
OD1 C:ASN434 4.4 44.6 1.0
HA C:GLU355 4.5 27.5 1.0
CB C:ARG356 4.6 32.0 1.0
OE2 C:GLU354 4.7 49.4 1.0
O C:HOH1377 4.7 25.2 1.0
HD1 C:PHE359 4.7 20.3 1.0
HB3 C:GLU354 4.7 39.8 1.0
CD1 C:PHE359 4.7 16.9 1.0
HE C:ARG356 4.8 54.0 1.0
H C:PHE359 4.8 29.5 1.0
O C:HOH1449 4.8 20.8 1.0
C C:ARG356 4.8 26.0 1.0
C C:ILE353 4.8 20.8 1.0
CD2 C:PHE359 4.9 20.0 1.0
N C:GLU354 5.0 23.1 1.0

Reference:

H.Y.Fung, S.C.Fu, Y.M.Chook. Nuclear Export Receptor CRM1 Recognizes Diverse Conformations in Nuclear Export Signals. Elife V. 6 2017.
ISSN: ESSN 2050-084X
PubMed: 28282025
DOI: 10.7554/ELIFE.23961
Page generated: Fri Jul 26 18:24:31 2024

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