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Chlorine in PDB 5uxm: Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound

Enzymatic activity of Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound

All present enzymatic activity of Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound:
2.5.1.54;

Protein crystallography data

The structure of Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound, PDB code: 5uxm was solved by O.W.Sterritt, G.B.Jameson, E.J.Parker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 75.79 / 1.54
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 81.680, 100.370, 115.600, 90.00, 90.00, 90.00
R / Rfree (%) 18.5 / 21

Other elements in 5uxm:

The structure of Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound also contains other interesting chemical elements:

Cobalt (Co) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound (pdb code 5uxm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound, PDB code: 5uxm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5uxm

Go back to Chlorine Binding Sites List in 5uxm
Chlorine binding site 1 out of 2 in the Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl506

b:44.6
occ:1.00
O A:ALA368 3.8 17.7 1.0
CB A:ALA372 3.9 18.9 1.0
CA A:ARG369 4.0 19.2 1.0
C A:ALA368 4.0 17.3 1.0
CG A:ARG369 4.1 26.8 1.0
N A:ARG369 4.1 17.6 1.0
O A:HOH654 4.4 24.3 1.0
CB A:ALA368 4.5 19.0 1.0
CB A:ARG369 4.6 23.5 1.0
CA A:ALA368 4.9 18.3 1.0

Chlorine binding site 2 out of 2 in 5uxm

Go back to Chlorine Binding Sites List in 5uxm
Chlorine binding site 2 out of 2 in the Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Type II DAH7PS From Pseudomonas Aeruginosa with Trp Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl507

b:25.4
occ:1.00
O A:HOH873 3.0 21.4 1.0
O A:HOH909 3.1 33.1 1.0
NH1 A:ARG246 3.2 13.3 1.0
CG A:ARG246 3.6 12.3 1.0
CD A:ARG246 3.8 12.7 1.0
CD A:PRO39 3.8 12.3 1.0
CB A:ARG246 3.9 12.3 1.0
CG A:PRO39 4.1 13.2 1.0
CZ A:ARG246 4.3 12.6 1.0
NE A:ARG246 4.5 12.9 1.0
CB A:PRO39 4.7 12.8 1.0
O A:HOH720 4.7 27.5 1.0
N A:PRO39 4.8 11.8 1.0

Reference:

O.W.Sterritt, S.A.Kessans, G.B.Jameson, E.J.Parker. A Pseudoisostructural Type II DAH7PS Enzyme From Pseudomonas Aeruginosa: Alternative Evolutionary Strategies to Control Shikimate Pathway Flux. Biochemistry V. 57 2667 2018.
ISSN: ISSN 1520-4995
PubMed: 29608284
DOI: 10.1021/ACS.BIOCHEM.8B00082
Page generated: Fri Jul 26 18:26:25 2024

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