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Chlorine in PDB 5uze: Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182

Enzymatic activity of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182

All present enzymatic activity of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182:
1.1.1.205;

Protein crystallography data

The structure of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182, PDB code: 5uze was solved by N.Maltseva, Y.Kim, R.Mulligan, M.Makowska-Grzyska, M.Gu, D.R.Gollapalli, L.Hedstrom, A.Joachimiak, W.F.Anderson, Center For Structural Genomicsof Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.39 / 2.27
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 64.777, 77.662, 80.321, 110.03, 103.99, 105.46
R / Rfree (%) 19.4 / 25.5

Other elements in 5uze:

The structure of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 also contains other interesting chemical elements:

Fluorine (F) 12 atoms
Potassium (K) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 (pdb code 5uze). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182, PDB code: 5uze:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5uze

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Chlorine binding site 1 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:55.1
occ:1.00
 CL A:8L1501 0.0 55.1 1.0
C20 A:8L1501 1.8 48.7 1.0
C21 A:8L1501 2.8 42.4 1.0
C19 A:8L1501 2.8 49.8 1.0
S A:8L1501 3.0 72.6 1.0
C24 A:8L1501 3.2 63.8 1.0
O C:GLY439 3.3 42.5 1.0
C C:GLY439 3.3 47.1 1.0
CA C:GLY439 3.7 41.9 1.0
CD2 A:HIS249 3.8 46.8 1.0
N C:TYR440 3.8 39.0 1.0
O C:VAL23 3.9 47.3 1.0
CB A:HIS249 4.0 43.9 1.0
C22 A:8L1501 4.1 39.9 1.0
C18 A:8L1501 4.1 43.0 1.0
CD C:PRO25 4.1 48.5 1.0
CG A:HIS249 4.2 45.4 1.0
OG C:SER21 4.3 67.5 1.0
CA C:TYR440 4.4 44.3 1.0
N5 A:8L1501 4.5 68.6 1.0
C17 A:8L1501 4.6 39.9 1.0
CG C:PRO25 4.6 53.1 1.0
C26 A:8L1501 4.7 75.5 1.0
CB C:SER21 4.7 54.7 1.0
CA C:LEU24 4.9 56.9 1.0
NE2 A:HIS249 5.0 47.2 1.0

Chlorine binding site 2 out of 4 in 5uze

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Chlorine binding site 2 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:42.7
occ:1.00
 CL B:8L1502 0.0 42.7 1.0
C20 B:8L1502 1.8 28.1 1.0
C21 B:8L1502 2.7 35.4 1.0
C19 B:8L1502 2.8 33.3 1.0
S B:8L1502 3.1 67.8 1.0
C24 B:8L1502 3.3 61.3 1.0
C A:GLY439 3.4 38.3 1.0
O A:GLY439 3.4 46.0 1.0
CA A:GLY439 3.7 34.2 1.0
CD2 B:HIS249 3.8 36.3 1.0
N A:TYR440 3.9 35.3 1.0
O A:VAL23 3.9 54.0 1.0
CD A:PRO25 4.0 41.5 1.0
CB B:HIS249 4.0 39.2 1.0
C22 B:8L1502 4.1 31.6 1.0
C18 B:8L1502 4.1 32.1 1.0
CG B:HIS249 4.2 35.7 1.0
CG A:PRO25 4.3 40.9 1.0
CA A:TYR440 4.5 31.8 1.0
OG A:SER21 4.5 43.1 1.0
C17 B:8L1502 4.6 38.6 1.0
N5 B:8L1502 4.6 69.1 1.0
C26 B:8L1502 4.8 70.4 1.0
CB A:SER21 4.9 47.6 1.0
N A:PRO25 4.9 47.5 1.0
NE2 B:HIS249 5.0 36.5 1.0

Chlorine binding site 3 out of 4 in 5uze

Go back to Chlorine Binding Sites List in 5uze
Chlorine binding site 3 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl501

b:63.5
occ:1.00
 CL C:8L1501 0.0 63.5 1.0
C20 C:8L1501 1.8 66.3 1.0
C21 C:8L1501 2.7 67.5 1.0
C19 C:8L1501 2.8 69.6 1.0
S C:8L1501 3.2 87.5 1.0
C24 C:8L1501 3.3 83.5 1.0
C D:GLY439 3.3 49.7 1.0
CA D:GLY439 3.4 50.2 1.0
O D:GLY439 3.6 51.5 1.0
N D:TYR440 3.8 47.5 1.0
CD2 C:HIS249 3.9 53.1 1.0
CD D:PRO25 4.0 68.0 1.0
O D:VAL23 4.0 62.2 1.0
C22 C:8L1501 4.0 67.7 1.0
CB C:HIS249 4.1 47.6 1.0
C18 C:8L1501 4.1 64.6 1.0
CG C:HIS249 4.3 57.1 1.0
CG D:PRO25 4.4 60.4 1.0
OG D:SER21 4.5 58.8 1.0
CA D:TYR440 4.5 47.5 1.0
N5 C:8L1501 4.6 88.6 1.0
C17 C:8L1501 4.6 66.8 1.0
CB D:SER21 4.8 56.6 1.0
N D:GLY439 4.8 53.8 1.0
C26 C:8L1501 4.8 89.8 1.0
N D:PRO25 4.9 70.1 1.0
CA D:LEU24 4.9 61.7 1.0
O D:SER436 4.9 46.3 1.0

Chlorine binding site 4 out of 4 in 5uze

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Chlorine binding site 4 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl501

b:48.8
occ:1.00
 CL D:8L1501 0.0 48.8 1.0
C20 D:8L1501 1.8 44.6 1.0
C21 D:8L1501 2.7 40.3 1.0
C19 D:8L1501 2.8 42.0 1.0
S D:8L1501 3.0 60.9 1.0
C B:GLY439 3.2 38.0 1.0
O B:GLY439 3.2 36.1 1.0
C24 D:8L1501 3.3 53.3 1.0
CD2 D:HIS249 3.4 37.1 1.0
N B:TYR440 3.5 35.2 1.0
CA B:GLY439 3.6 38.0 1.0
CB D:HIS249 3.9 29.6 1.0
CG D:HIS249 4.0 33.8 1.0
C22 D:8L1501 4.0 38.0 1.0
O B:VAL23 4.0 42.5 1.0
C18 D:8L1501 4.1 38.2 1.0
CA B:TYR440 4.1 26.7 1.0
OG B:SER21 4.3 42.3 1.0
CD B:PRO25 4.5 49.3 1.0
C17 D:8L1501 4.6 41.2 1.0
N5 D:8L1501 4.6 50.6 1.0
NE2 D:HIS249 4.7 34.9 1.0
CB B:SER21 4.7 31.5 1.0
C26 D:8L1501 4.7 64.7 1.0
CG B:PRO25 4.7 51.9 1.0
CD1 B:TYR440 4.9 37.9 1.0
N B:GLY439 4.9 32.8 1.0
O B:SER436 4.9 32.6 1.0
CG B:TYR440 5.0 35.5 1.0

Reference:

N.Maltseva, Y.Kim, R.Mulligan, M.Makowska-Grzyska, M.Gu, D.R.Gollapalli, L.Hedstrom, A.Joachimiak, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P182 To Be Published.
Page generated: Fri Jul 26 18:29:01 2024

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