Chlorine in PDB 5uzs: Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200

Enzymatic activity of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200

All present enzymatic activity of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200:
1.1.1.205;

Protein crystallography data

The structure of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200, PDB code: 5uzs was solved by N.Maltseva, Y.Kim, R.Mulligan, M.Makowska-Grzyska, M.Gu, D.R.Gollapalli, L.Hedstrom, A.Joachimiak, W.F.Anderson, Center For Structural Genomicsof Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.09 / 2.37
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 111.124, 144.396, 87.527, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 23.8

Other elements in 5uzs:

The structure of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Potassium (K) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 (pdb code 5uzs). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200, PDB code: 5uzs:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5uzs

Go back to Chlorine Binding Sites List in 5uzs
Chlorine binding site 1 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:45.8
occ:1.00
 CL A:8L4501 0.0 45.8 1.0
C20 A:8L4501 1.8 40.3 1.0
C21 A:8L4501 2.8 38.7 1.0
C19 A:8L4501 2.8 39.1 1.0
C C:GLY439 3.5 28.0 1.0
O C:GLY439 3.7 36.3 1.0
CA C:GLY439 3.7 28.0 1.0
CD2 A:HIS249 3.8 25.2 1.0
CB A:HIS249 3.9 32.4 1.0
N C:TYR440 3.9 30.3 1.0
O C:VAL23 3.9 37.8 1.0
C22 A:8L4501 4.0 41.5 1.0
C18 A:8L4501 4.1 36.5 1.0
CD2 C:LEU24 4.2 36.5 1.0
CG A:HIS249 4.2 28.7 1.0
CD C:PRO25 4.2 37.9 1.0
CA C:TYR440 4.6 24.2 1.0
C17 A:8L4501 4.6 37.0 1.0
CG C:PRO25 4.6 29.6 1.0
CA C:LEU24 4.6 43.1 1.0
OG C:SER21 4.8 34.1 1.0
C C:VAL23 5.0 35.7 1.0

Chlorine binding site 2 out of 4 in 5uzs

Go back to Chlorine Binding Sites List in 5uzs
Chlorine binding site 2 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:51.2
occ:1.00
 CL B:8L4501 0.0 51.2 1.0
C20 B:8L4501 1.8 48.5 1.0
C21 B:8L4501 2.8 47.2 1.0
C19 B:8L4501 2.8 43.1 1.0
C A:GLY439 3.6 50.4 1.0
CA A:GLY439 3.8 50.3 1.0
CB B:HIS249 3.8 44.2 1.0
O A:GLY439 3.8 51.7 1.0
CD2 B:HIS249 3.9 45.2 1.0
CD A:PRO25 4.0 60.2 1.0
N A:TYR440 4.0 49.1 1.0
C22 B:8L4501 4.0 44.8 1.0
C18 B:8L4501 4.1 36.8 1.0
CD1 A:LEU24 4.1 65.2 1.0
O A:VAL23 4.2 57.7 1.0
CG B:HIS249 4.2 45.6 1.0
CG A:PRO25 4.5 55.4 1.0
C17 B:8L4501 4.6 41.6 1.0
CA A:TYR440 4.6 51.2 1.0
OG A:SER21 4.8 48.7 1.0
CA A:LEU24 4.8 60.6 1.0
N A:PRO25 5.0 60.5 1.0

Chlorine binding site 3 out of 4 in 5uzs

Go back to Chlorine Binding Sites List in 5uzs
Chlorine binding site 3 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl501

b:35.5
occ:1.00
 CL C:8L4501 0.0 35.5 1.0
C20 C:8L4501 1.8 32.8 1.0
C19 C:8L4501 2.7 27.6 1.0
C21 C:8L4501 2.8 26.4 1.0
O D:GLY439 3.3 26.1 1.0
C D:GLY439 3.4 24.9 1.0
CA D:GLY439 3.7 24.1 1.0
O D:VAL23 3.9 40.8 1.0
CD D:PRO25 3.9 34.0 1.0
CB C:HIS249 3.9 30.2 1.0
CD2 C:HIS249 4.0 26.5 1.0
N D:TYR440 4.0 25.4 1.0
C18 C:8L4501 4.0 37.7 1.0
C22 C:8L4501 4.0 24.6 1.0
CG C:HIS249 4.3 30.8 1.0
CD2 D:LEU24 4.5 32.7 1.0
CA D:LEU24 4.5 35.9 1.0
CG D:PRO25 4.5 34.1 1.0
C17 C:8L4501 4.6 35.2 1.0
CA D:TYR440 4.6 25.3 1.0
OG D:SER21 4.7 27.8 1.0
N D:PRO25 4.8 40.6 1.0
C D:VAL23 4.9 34.1 1.0

Chlorine binding site 4 out of 4 in 5uzs

Go back to Chlorine Binding Sites List in 5uzs
Chlorine binding site 4 out of 4 in the Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl501

b:38.8
occ:1.00
 CL D:8L4501 0.0 38.8 1.0
C20 D:8L4501 1.8 28.3 1.0
C19 D:8L4501 2.7 22.7 1.0
C21 D:8L4501 2.8 30.8 1.0
O B:GLY439 3.4 22.9 1.0
C B:GLY439 3.4 26.2 1.0
CA B:GLY439 3.7 21.8 1.0
CD2 D:HIS249 3.7 25.7 1.0
O B:VAL23 3.7 31.5 1.0
CB D:HIS249 3.9 24.0 1.0
CD B:PRO25 3.9 35.5 1.0
N B:TYR440 4.0 21.9 1.0
C18 D:8L4501 4.0 25.1 1.0
C22 D:8L4501 4.1 29.6 1.0
CG D:HIS249 4.1 32.9 1.0
CD2 B:LEU24 4.4 29.2 1.0
CG B:PRO25 4.5 34.7 1.0
CA B:TYR440 4.5 23.0 1.0
C17 D:8L4501 4.6 29.6 1.0
CA B:LEU24 4.6 36.7 1.0
OG B:SER21 4.6 37.7 1.0
C B:VAL23 4.8 31.8 1.0
N B:PRO25 4.9 34.6 1.0
NE2 D:HIS249 5.0 27.1 1.0

Reference:

N.Maltseva, Y.Kim, R.Mulligan, M.Makowska-Grzyska, M.Gu, D.R.Gollapalli, L.Hedstrom, A.Joachimiak, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Inosine 5'-Monophosphate Dehydrogenase From Clostridium Perfringens Complexed with Imp and P200 To Be Published.
Page generated: Sat Dec 12 12:32:52 2020

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