Chlorine in PDB 5v0u: Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4723 4-(5-Chlorothiophen-2-Yl)-1H-Pyrazole

Protein crystallography data

The structure of Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4723 4-(5-Chlorothiophen-2-Yl)-1H-Pyrazole, PDB code: 5v0u was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.06 / 2.45
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 68.850, 68.850, 396.330, 90.00, 90.00, 120.00
R / Rfree (%) 17 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4723 4-(5-Chlorothiophen-2-Yl)-1H-Pyrazole (pdb code 5v0u). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4723 4-(5-Chlorothiophen-2-Yl)-1H-Pyrazole, PDB code: 5v0u:

Chlorine binding site 1 out of 1 in 5v0u

Go back to Chlorine Binding Sites List in 5v0u
Chlorine binding site 1 out of 1 in the Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4723 4-(5-Chlorothiophen-2-Yl)-1H-Pyrazole


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4723 4-(5-Chlorothiophen-2-Yl)-1H-Pyrazole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl801

b:88.0
occ:0.83
CL A:8QG801 0.0 88.0 0.8
C02 A:8QG801 1.8 80.7 0.8
C03 A:8QG801 2.8 79.5 0.8
S06 A:8QG801 3.1 82.5 0.8
CB A:MET311 3.8 43.1 1.0
CB A:LEU345 4.0 38.5 1.0
NE A:ARG312 4.0 0.8 1.0
C04 A:8QG801 4.0 82.3 0.8
OE1 A:GLU349 4.1 0.0 1.0
CD A:GLU349 4.2 96.5 1.0
C05 A:8QG801 4.3 84.0 0.8
NH2 A:ARG312 4.3 0.5 1.0
CD1 A:LEU345 4.3 42.6 1.0
CZ A:ARG312 4.3 0.6 1.0
CG2 A:ILE308 4.4 47.9 1.0
CG A:MET311 4.4 40.6 1.0
OE2 A:GLU349 4.5 95.8 1.0
CE A:MET311 4.6 35.5 1.0
CG A:GLU349 4.6 90.3 1.0
O A:ILE308 4.7 51.3 1.0
O A:LEU345 4.7 45.6 1.0
CG A:ARG312 4.7 85.3 1.0
CD A:ARG312 4.7 97.9 1.0
C A:LEU345 4.7 49.6 1.0
CG A:LEU345 4.8 51.3 1.0
CA A:ILE308 4.9 45.9 1.0
N A:ARG312 5.0 54.4 1.0
CA A:LEU345 5.0 43.0 1.0

Reference:

P.G.Pierce, M.M.Muruthii, S.O.Moen, J.Abendroth, D.R.Davies, M.Labaied, V.M.Marathias, D.W.Begley, D.Hokanson, R.K.Suto, B.K.Hubbard, P.J.Myler, D.D.Lorimer, T.E.Edwards. Fragment Screening By Std uc(Nmr) Identifies Novel Site Binders Against Influenza A Virus Polymerase To Be Published.
Page generated: Sat Dec 12 12:32:59 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy