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Chlorine in PDB 5v0z: Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).

Protein crystallography data

The structure of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group)., PDB code: 5v0z was solved by M.P.Czub, P.J.Porebski, A.A.Knapik, E.Niedzialkowska, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.26
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 75.434, 75.434, 93.178, 90.00, 90.00, 120.00
R / Rfree (%) 13.6 / 16.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). (pdb code 5v0z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group)., PDB code: 5v0z:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 5v0z

Go back to Chlorine Binding Sites List in 5v0z
Chlorine binding site 1 out of 6 in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:18.3
occ:1.00
 O C:HOH335 3.0 17.9 0.5
O A:HOH475 3.1 18.9 0.5
O A:HOH466 3.1 20.8 1.0
ND2 A:ASN84 3.1 11.6 1.0
C2P A:COA206 3.3 28.4 0.5
S1P A:COA206 3.4 24.6 0.5
C2P A:COA206 3.5 17.8 0.5
S1P A:COA206 3.6 18.8 0.5
CA A:GLY104 3.7 9.4 1.0
CB A:ASN84 3.7 10.4 1.0
CG A:ASN84 3.9 10.2 1.0
CD A:PRO105 3.9 8.9 1.0
O A:ILE103 4.1 9.5 1.0
CE C:MET90 4.3 13.3 1.0
C3P A:COA206 4.3 30.2 0.5
N A:GLY104 4.3 9.3 1.0
O C:HOH517 4.4 37.0 1.0
O C:HOH455 4.4 35.7 1.0
C A:ILE103 4.5 9.3 1.0
N A:PRO105 4.5 8.6 1.0
C A:GLY104 4.5 8.8 1.0
O A:HOH506 4.6 27.2 1.0
C3P A:COA206 4.7 19.7 0.5
O C:HOH472 4.7 48.8 1.0
NE2 C:HIS114 4.9 18.0 1.0

Chlorine binding site 2 out of 6 in 5v0z

Go back to Chlorine Binding Sites List in 5v0z
Chlorine binding site 2 out of 6 in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:37.5
occ:1.00
 O A:HOH342 3.0 26.6 1.0
O A:HOH465 3.1 27.8 1.0
N A:LEU116 3.2 17.0 1.0
O A:HOH567 3.3 38.5 1.0
CA A:PRO115 3.7 15.3 1.0
C A:PRO115 3.9 15.2 1.0
CB A:LEU116 4.0 21.9 1.0
CG A:LEU116 4.1 22.9 1.0
CA A:LEU116 4.2 18.1 1.0
CZ2 A:TRP12 4.3 19.4 1.0
CH2 A:TRP12 4.4 18.2 1.0
CB A:PRO115 4.4 17.8 1.0
O A:HIS114 4.6 16.0 1.0
CD1 A:LEU116 4.6 32.1 1.0
O B:HOH492 4.8 48.3 1.0
O A:HOH457 4.8 35.3 1.0
N A:PRO115 4.8 15.2 1.0
O A:HOH481 4.9 38.8 1.0
N A:ASN117 4.9 17.1 1.0

Chlorine binding site 3 out of 6 in 5v0z

Go back to Chlorine Binding Sites List in 5v0z
Chlorine binding site 3 out of 6 in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:18.5
occ:1.00
 O A:HOH361 3.0 18.8 0.5
O B:HOH490 3.1 19.6 0.5
ND2 B:ASN84 3.1 11.7 1.0
O B:HOH464 3.1 21.2 1.0
C2P B:COA206 3.4 25.7 0.5
S1P B:COA206 3.5 25.7 0.5
C2P B:COA206 3.5 18.9 0.5
S1P B:COA206 3.6 18.6 0.5
CA B:GLY104 3.6 9.2 1.0
CB B:ASN84 3.8 10.0 1.0
CD B:PRO105 3.9 9.7 1.0
CG B:ASN84 3.9 10.1 1.0
O B:ILE103 4.1 9.5 1.0
O A:HOH520 4.3 34.8 1.0
N B:GLY104 4.3 8.7 1.0
CE A:MET90 4.3 13.5 1.0
C3P B:COA206 4.4 27.4 0.5
C B:ILE103 4.5 8.8 1.0
N B:PRO105 4.5 8.8 1.0
C B:GLY104 4.5 8.8 1.0
O A:HOH431 4.5 31.4 1.0
O B:HOH514 4.6 29.7 1.0
C3P B:COA206 4.7 15.4 0.5
O A:HOH413 4.7 50.6 1.0
NE2 A:HIS114 5.0 19.5 1.0
O A:HOH401 5.0 42.8 1.0

Chlorine binding site 4 out of 6 in 5v0z

Go back to Chlorine Binding Sites List in 5v0z
Chlorine binding site 4 out of 6 in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl204

b:41.8
occ:1.00
 O B:HOH495 2.9 53.8 1.0
O B:HOH313 3.0 35.9 1.0
O B:HOH570 3.1 44.5 1.0
N B:LEU116 3.2 17.8 1.0
CA B:PRO115 3.7 17.6 1.0
C B:PRO115 4.0 17.6 1.0
CB B:LEU116 4.0 19.8 1.0
CG B:LEU116 4.0 20.8 1.0
CA B:LEU116 4.2 17.1 1.0
CB B:PRO115 4.4 19.7 1.0
CZ2 B:TRP12 4.4 25.8 1.0
O B:HIS114 4.5 16.6 1.0
CH2 B:TRP12 4.6 19.9 1.0
CD1 B:LEU116 4.6 28.9 1.0
O B:HOH499 4.6 51.7 1.0
N B:PRO115 4.8 17.4 1.0
N B:ASN117 4.9 17.9 1.0
O B:HOH430 4.9 43.7 1.0

Chlorine binding site 5 out of 6 in 5v0z

Go back to Chlorine Binding Sites List in 5v0z
Chlorine binding site 5 out of 6 in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl203

b:18.7
occ:1.00
 O B:HOH373 3.0 19.1 0.5
O C:HOH474 3.1 20.5 0.5
ND2 C:ASN84 3.1 11.1 1.0
O C:HOH453 3.2 20.4 1.0
C2P B:COA205 3.2 25.8 0.5
C2P B:COA205 3.4 21.8 0.5
S1P B:COA205 3.4 23.4 0.5
S1P B:COA205 3.6 23.5 0.5
CA C:GLY104 3.6 8.5 1.0
CB C:ASN84 3.8 9.8 1.0
CD C:PRO105 3.9 9.6 1.0
CG C:ASN84 3.9 9.8 1.0
O C:ILE103 4.1 9.6 1.0
CE B:MET90 4.2 14.5 1.0
C3P B:COA205 4.3 25.8 0.5
O B:HOH470 4.3 47.7 1.0
N C:GLY104 4.3 9.0 1.0
O B:HOH546 4.4 36.6 1.0
C C:ILE103 4.5 8.9 1.0
C C:GLY104 4.5 8.2 1.0
N C:PRO105 4.5 8.6 1.0
C3P B:COA205 4.5 20.7 0.5
O C:HOH503 4.5 27.9 1.0
O B:HOH410 4.9 41.5 1.0
NE2 B:HIS114 5.0 19.0 1.0

Chlorine binding site 6 out of 6 in 5v0z

Go back to Chlorine Binding Sites List in 5v0z
Chlorine binding site 6 out of 6 in the Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl204

b:36.2
occ:1.00
 O C:HOH325 3.1 30.0 1.0
O C:HOH451 3.1 25.4 1.0
O C:HOH558 3.2 47.4 1.0
N C:LEU116 3.2 16.2 1.0
CA C:PRO115 3.7 15.2 1.0
C C:PRO115 4.0 15.4 1.0
CB C:LEU116 4.1 19.1 1.0
CG C:LEU116 4.1 21.6 1.0
CA C:LEU116 4.2 17.3 1.0
CZ2 C:TRP12 4.3 21.2 1.0
CH2 C:TRP12 4.4 17.5 1.0
CB C:PRO115 4.4 16.9 1.0
O C:HIS114 4.6 15.1 1.0
CD1 C:LEU116 4.7 28.9 1.0
N C:PRO115 4.9 14.2 1.0
O C:HOH412 4.9 32.2 1.0
N C:ASN117 4.9 16.1 1.0
O C:HOH471 4.9 36.8 1.0

Reference:

M.P.Czub, P.J.Porebski, A.A.Knapik, E.Niedzialkowska, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Galactoside O-Acetyltransferase Complex with Coa (P32 Space Group). To Be Published.
Page generated: Fri Jul 26 18:32:19 2024

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