Chlorine in PDB 5vnr: X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature

All present enzymatic activity of X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature:
3.2.1.17;

The structure of X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature, PDB code: 5vnr was solved by L.Li, S.Shukla, F.Meilleur, R.F.Standaert, J.Pierce, D.A.A.Myles, M.J.Cuneo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.55 / 1.63
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	59.830, 59.830, 95.461, 90.00, 90.00, 120.00
R / Rfree (%)	15.8 / 18.6

The structure of X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature (pdb code 5vnr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature, PDB code: 5vnr:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl204 b:23.7 occ:1.00 O A:HOH582 3.0 20.9 1.0 N A:ARG145 3.2 13.3 1.0 N A:ASN144 3.4 12.6 1.0 O A:HOH485 3.4 40.2 1.0 C A:THR142 3.4 11.6 1.0 CA A:THR142 3.5 13.9 1.0 CB A:THR142 3.6 16.0 1.0 N A:PRO143 3.7 11.5 1.0 CB A:ASN144 3.7 14.6 1.0 O A:THR142 3.8 12.9 1.0 CB A:ARG145 3.8 15.7 1.0 CA A:ASN144 3.9 12.6 1.0 C A:ASN144 4.0 12.3 1.0 CA A:ARG145 4.1 12.1 1.0 CD A:PRO143 4.2 13.8 1.0 C A:PRO143 4.3 11.6 1.0 CG2 A:THR142 4.3 13.8 1.0 CA A:PRO143 4.6 10.1 1.0 O A:HOH357 4.7 21.7 1.0 OG1 A:THR142 4.8 16.3 1.0 CG A:ASN144 4.8 22.1 1.0 N A:THR142 4.9 12.8 1.0 CG A:PRO143 4.9 11.6 1.0

Chlorine binding site 2 out of 2 in the X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl205 b:21.5 occ:1.00 O A:HOH410 3.1 15.7 1.0 O A:HOH402 3.2 19.6 1.0 O A:HOH364 3.4 24.5 1.0 CE1 A:HIS31 3.7 13.6 1.0 CB A:ALA49 3.9 14.9 1.0 NE2 A:HIS31 4.0 14.2 1.0 O A:HOH374 4.4 27.3 1.0 CA A:ALA49 4.4 12.3 1.0 OE1 A:GLN69 4.5 18.5 1.0 O A:HOH352 4.6 34.4 1.0 CD2 A:LEU66 4.7 17.8 1.0 ND1 A:HIS31 4.8 14.4 1.0

L.Li, S.Shukla, F.Meilleur, R.F.Standaert, J.Pierce, D.A.A.Myles, M.J.Cuneo. Neutron Crystallographic Studies of T4 Lysozyme at Cryogenic Temperature. Protein Sci. V. 26 2098 2017.
ISSN: ESSN 1469-896X
PubMed: 28707382
DOI: 10.1002/PRO.3231