Chlorine in PDB 5vt7: Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1

Enzymatic activity of Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1

All present enzymatic activity of Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1:
3.1.3.16;

Protein crystallography data

The structure of Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1, PDB code: 5vt7 was solved by M.-J.Cao, Y.-L.Zhang, X.Liu, H.Huang, X.E.Zhou, W.-L.Wang, A.Zeng, C.-Z.Zhao, T.Si, J.-M.Du, W.-W.Wu, F.-X.Wang, H.X.Xu, J.-K.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	39.17 / 2.62
*Space group*	P 2₁ 2₁ 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	61.112, 66.478, 145.410, 90.00, 90.00, 90.00
*R / R_free (%)*	18.2 / 22.1

Other elements in 5vt7:

The structure of Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1 also contains other interesting chemical elements:

Magnesium

(Mg)

3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1 (pdb code 5vt7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1, PDB code: 5vt7:

Chlorine binding site 1 out of 1 in 5vt7

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Chlorine Binding Sites List in 5vt7

Chlorine binding site 1 out of 1 in the Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1 within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl300 b:65.1 occ:1.00	CL	A:A1C300	0.0	65.1	1.0
	C5	A:A1C300	1.8	55.4	1.0
	C2	A:A1C300	2.7	43.1	1.0
	C6	A:A1C300	2.7	44.4	1.0
	C17	A:A1C300	3.0	40.4	1.0
	CG1	A:VAL169	3.8	20.9	1.0
	OH	A:TYR124	3.8	30.8	1.0
	CZ	A:TYR124	3.9	27.8	1.0
	C1	A:A1C300	4.0	50.6	1.0
	C7	A:A1C300	4.0	40.8	1.0
	CE1	A:TYR124	4.1	26.3	1.0
	CG1	A:VAL166	4.2	29.1	1.0
	CG2	A:VAL170	4.2	20.8	1.0
	CB	A:VAL169	4.3	31.1	1.0
	C3	A:A1C300	4.5	45.6	1.0
	CD1	A:LEU121	4.5	39.2	1.0
	CE2	A:TYR124	4.6	25.8	1.0
	O	A:VAL166	4.8	29.8	1.0
	CD1	A:TYR124	4.8	29.4	1.0
	CA	A:VAL166	5.0	29.6	1.0

Reference:

M.J.Cao, Y.L.Zhang, X.Liu, H.Huang, X.E.Zhou, W.L.Wang, A.Zeng, C.Z.Zhao, T.Si, J.Du, W.W.Wu, F.X.Wang, H.E.Xu, J.K.Zhu. Combining Chemical and Genetic Approaches to Increase Drought Resistance in Plants. Nat Commun V. 8 1183 2017.
ISSN: ESSN 2041-1723
PubMed: 29084945
DOI: 10.1038/S41467-017-01239-3

Page generated: Fri Jul 26 19:02:42 2024

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