Chlorine in PDB 5w2j: Crystal Structure of Dimeric Form of Mouse Glutaminase C

Enzymatic activity of Crystal Structure of Dimeric Form of Mouse Glutaminase C

All present enzymatic activity of Crystal Structure of Dimeric Form of Mouse Glutaminase C:
3.5.1.2;

Protein crystallography data

The structure of Crystal Structure of Dimeric Form of Mouse Glutaminase C, PDB code: 5w2j was solved by R.A.Cerione, Y.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 84.940, 100.880, 145.450, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 22.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Dimeric Form of Mouse Glutaminase C (pdb code 5w2j). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Dimeric Form of Mouse Glutaminase C, PDB code: 5w2j:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5w2j

Go back to Chlorine Binding Sites List in 5w2j
Chlorine binding site 1 out of 2 in the Crystal Structure of Dimeric Form of Mouse Glutaminase C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Dimeric Form of Mouse Glutaminase C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:62.5
occ:1.00
O A:HOH753 2.7 53.2 1.0
N A:VAL489 2.9 42.0 1.0
OG A:SER291 3.0 37.9 1.0
CB A:SER291 3.2 39.2 1.0
N A:SER291 3.2 38.1 1.0
CB A:VAL489 3.3 44.7 1.0
CB A:GLN290 3.5 40.6 1.0
OH A:TYR471 3.6 72.2 1.0
CG1 A:VAL489 3.6 38.8 1.0
CA A:GLY488 3.7 40.8 1.0
CA A:VAL489 3.7 42.2 1.0
C A:GLY488 3.7 43.3 1.0
CA A:SER291 3.8 36.7 1.0
OE1 A:GLN290 4.2 53.3 1.0
C A:GLN290 4.2 39.2 1.0
CG A:GLN290 4.4 45.7 1.0
CA A:GLN290 4.4 40.3 1.0
CZ A:TYR471 4.6 78.2 1.0
CG2 A:VAL489 4.6 44.2 1.0
CD A:GLN290 4.7 49.7 1.0
O A:GLY488 4.9 46.4 1.0
C A:VAL489 4.9 41.2 1.0
CE1 A:TYR471 4.9 66.3 1.0
N A:GLY488 4.9 39.9 1.0
O A:SER487 4.9 40.4 1.0

Chlorine binding site 2 out of 2 in 5w2j

Go back to Chlorine Binding Sites List in 5w2j
Chlorine binding site 2 out of 2 in the Crystal Structure of Dimeric Form of Mouse Glutaminase C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Dimeric Form of Mouse Glutaminase C within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:82.0
occ:1.00
N B:SER291 2.9 53.0 1.0
OG B:SER291 2.9 52.6 1.0
CB B:SER291 2.9 49.6 1.0
N B:VAL489 3.0 54.9 1.0
OH B:TYR471 3.3 92.7 1.0
CA B:SER291 3.4 52.2 1.0
CA B:GLY488 3.5 45.9 1.0
CB B:GLN290 3.5 57.6 1.0
CB B:VAL489 3.6 62.5 1.0
C B:GLY488 3.8 50.7 1.0
CG1 B:VAL489 3.8 62.5 1.0
C B:GLN290 4.0 54.6 1.0
CA B:VAL489 4.0 55.9 1.0
CA B:GLN290 4.3 54.1 1.0
CZ B:TYR471 4.5 83.0 1.0
C B:SER291 4.6 47.0 1.0
CG B:GLN290 4.6 61.1 1.0
OE1 B:GLN290 4.7 69.6 1.0
O B:SER487 4.7 41.4 1.0
N B:GLY488 4.8 44.5 1.0
CG2 B:VAL489 4.9 64.0 1.0

Reference:

Y.Li, J.W.Erickson, C.A.Stalnecker, W.P.Katt, Q.Huang, R.A.Cerione, S.Ramachandran. Mechanistic Basis of Glutaminase Activation: A Key Enzyme That Promotes Glutamine Metabolism in Cancer Cells. J. Biol. Chem. V. 291 20900 2016.
ISSN: ESSN 1083-351X
PubMed: 27542409
DOI: 10.1074/JBC.M116.720268
Page generated: Sat Dec 12 12:35:34 2020

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