Chlorine in PDB 5w5b: Crystal Structure of Mycobacterium Tuberculosis Crp-Fnr Family Transcription Factor Cmr (RV1675C), Truncated Construct

Protein crystallography data

The structure of Crystal Structure of Mycobacterium Tuberculosis Crp-Fnr Family Transcription Factor Cmr (RV1675C), Truncated Construct, PDB code: 5w5b was solved by J.Cheung, M.Cassidy, C.Ginter, S.Ranganathan, D.J.Pata, K.A.Mcdonough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.88 / 1.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 55.109, 72.530, 53.939, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 21.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mycobacterium Tuberculosis Crp-Fnr Family Transcription Factor Cmr (RV1675C), Truncated Construct (pdb code 5w5b). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Mycobacterium Tuberculosis Crp-Fnr Family Transcription Factor Cmr (RV1675C), Truncated Construct, PDB code: 5w5b:

Chlorine binding site 1 out of 1 in 5w5b

Go back to Chlorine Binding Sites List in 5w5b
Chlorine binding site 1 out of 1 in the Crystal Structure of Mycobacterium Tuberculosis Crp-Fnr Family Transcription Factor Cmr (RV1675C), Truncated Construct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mycobacterium Tuberculosis Crp-Fnr Family Transcription Factor Cmr (RV1675C), Truncated Construct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:50.0
occ:1.00
NE A:ARG124 2.8 47.5 1.0
O A:HOH409 2.9 34.6 0.8
NE A:ARG96 3.1 59.0 1.0
O A:HOH456 3.1 35.8 1.0
CD A:ARG96 3.5 59.3 1.0
NH2 A:ARG124 3.6 72.8 1.0
CZ A:ARG124 3.6 64.9 1.0
CD A:ARG124 3.7 37.2 1.0
CG2 A:THR122 3.8 28.8 1.0
CB A:THR122 3.9 37.0 1.0
CG A:ARG96 4.0 56.5 1.0
CB A:ALA89 4.1 31.8 1.0
CG A:ARG124 4.2 45.3 1.0
CZ A:ARG96 4.2 53.4 1.0
OG1 A:THR122 4.5 35.3 1.0
NH2 A:ARG96 4.5 49.8 1.0
O A:HOH428 4.7 43.5 1.0
O A:GLY91 4.8 56.3 1.0
O A:THR122 4.8 32.8 1.0
O A:ALA89 4.9 29.3 1.0
NH1 A:ARG124 4.9 63.2 1.0
CG A:ARG93 4.9 84.4 1.0
CB A:ARG124 5.0 36.8 1.0

Reference:

S.Ranganathan, J.Cheung, M.Cassidy, C.Ginter, J.D.Pata, K.A.Mcdonough. Novel Structural Features Drive Dna Binding Properties of Cmr, A Crp Family Protein in Tb Complex Mycobacteria. Nucleic Acids Res. V. 46 403 2018.
ISSN: ESSN 1362-4962
PubMed: 29165665
DOI: 10.1093/NAR/GKX1148
Page generated: Sat Dec 12 12:35:45 2020

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