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Chlorine in PDB 5w6f: Crystal Structure of Bacteriophage CBA120 Tailspike Protein 3 (TSP3, ORF212)

Protein crystallography data

The structure of Crystal Structure of Bacteriophage CBA120 Tailspike Protein 3 (TSP3, ORF212), PDB code: 5w6f was solved by M.Plattner, M.M.Shneider, P.G.Leiman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.48 / 2.18
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 100.580, 66.781, 161.989, 90.00, 105.86, 90.00
R / Rfree (%) 18 / 21.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Bacteriophage CBA120 Tailspike Protein 3 (TSP3, ORF212) (pdb code 5w6f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Bacteriophage CBA120 Tailspike Protein 3 (TSP3, ORF212), PDB code: 5w6f:

Chlorine binding site 1 out of 1 in 5w6f

Go back to Chlorine Binding Sites List in 5w6f
Chlorine binding site 1 out of 1 in the Crystal Structure of Bacteriophage CBA120 Tailspike Protein 3 (TSP3, ORF212)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Bacteriophage CBA120 Tailspike Protein 3 (TSP3, ORF212) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl701

b:38.4
occ:1.00
O C:HOH1173 3.0 58.7 1.0
OG C:SER598 3.2 34.4 1.0
OG C:SER614 3.2 38.4 1.0
NH2 A:ARG585 3.3 29.4 1.0
N C:SER614 3.4 38.8 1.0
N C:SER598 3.6 34.1 1.0
CE1 A:TYR602 3.7 38.1 1.0
CB C:ALA597 3.8 32.2 1.0
CB C:SER614 3.9 39.5 1.0
O C:TRP612 4.0 39.5 1.0
CA C:ASN613 4.0 41.1 1.0
C C:ALA597 4.1 31.9 1.0
CA C:SER598 4.2 32.5 1.0
C C:ASN613 4.2 39.1 1.0
CA C:ALA597 4.2 32.1 1.0
CA C:SER614 4.2 41.5 1.0
CZ A:ARG585 4.2 31.2 1.0
CB C:SER598 4.3 35.0 1.0
NE A:ARG585 4.3 31.6 1.0
CD1 A:TYR602 4.3 36.7 1.0
CG2 A:THR604 4.3 39.2 1.0
CZ A:TYR602 4.4 37.1 1.0
OH A:TYR602 4.5 36.2 1.0
ND2 C:ASN613 4.5 44.7 1.0
CG C:ASN613 4.6 43.9 1.0
CB C:ASN613 4.9 40.9 1.0
OD1 C:ASN613 4.9 46.2 1.0
C C:TRP612 4.9 40.3 1.0
N C:VAL615 4.9 44.5 1.0
N C:ASN613 5.0 40.7 1.0

Reference:

M.Plattner, M.M.Shneider, N.P.Arbatsky, A.S.Shashkov, A.O.Chizhov, S.Nazarov, N.S.Prokhorov, N.M.I.Taylor, S.A.Buth, M.Gambino, Y.E.Gencay, L.Brondsted, E.M.Kutter, Y.A.Knirel, P.G.Leiman. Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120. J.Mol.Biol. V. 431 3718 2019.
ISSN: ESSN 1089-8638
PubMed: 31325442
DOI: 10.1016/J.JMB.2019.07.022
Page generated: Fri Jul 26 19:13:47 2024

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