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Chlorine in PDB 5w80: Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237

Protein crystallography data

The structure of Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237, PDB code: 5w80 was solved by M.El Bakkouri, D.Lovato, P.Loppnau, Y.H.Lin, F.Rutaganaria, M.S.Lopez, L.Shokat, C.Bountra, A.M.Edwards, C.H.Arrowsmith, D.Sibley, J.R.Walker, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.33 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.969, 72.815, 65.528, 90.00, 99.53, 90.00
R / Rfree (%) 18.5 / 23.7

Other elements in 5w80:

The structure of Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237 also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237 (pdb code 5w80). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237, PDB code: 5w80:

Chlorine binding site 1 out of 1 in 5w80

Go back to Chlorine Binding Sites List in 5w80
Chlorine binding site 1 out of 1 in the Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:32.3
occ:1.00
CL A:9XJ601 0.0 32.3 1.0
CAT A:9XJ601 1.7 24.9 1.0
CAS A:9XJ601 2.7 25.4 1.0
CAV A:9XJ601 2.7 23.1 1.0
O A:HOH854 3.5 30.9 1.0
CD2 A:LEU126 3.8 32.9 0.5
CD1 A:LEU198 3.8 31.8 1.0
OD1 A:ASP195 3.9 30.8 1.0
CD1 A:LEU126 3.9 26.9 0.5
CB A:LEU126 3.9 22.8 0.5
CB A:LEU126 4.0 24.8 0.5
CAP A:9XJ601 4.0 21.8 1.0
CAR A:9XJ601 4.0 24.4 1.0
CG A:LEU126 4.4 26.8 0.5
O A:HOH858 4.4 46.7 1.0
CD2 A:LEU198 4.5 34.7 1.0
CD A:LYS80 4.5 35.0 1.0
CG A:LEU126 4.5 29.9 0.5
CAQ A:9XJ601 4.5 23.7 1.0
CG A:LEU198 4.5 32.4 1.0
CB A:LYS80 4.6 26.0 1.0
CD1 A:LEU114 4.6 32.5 1.0
CD2 A:LEU126 4.6 27.5 0.5
NZ A:LYS80 4.8 34.0 1.0
SD A:MET112 4.8 29.6 1.0
CE A:MET112 4.8 25.9 1.0
CA A:ASP195 4.9 22.2 1.0
CE A:LYS80 4.9 41.1 1.0
N A:ASP195 4.9 23.5 1.0

Reference:

M.El Bakkouri, D.Lovato, P.Loppnau, Y.H.Lin, F.Rutaganaria, M.S.Lopez, L.Shokat, C.Bountra, A.M.Edwards, C.H.Arrowsmith, D.Sibley, R.Hui, J.R.Walker, Structural Genomics Consortium (Sgc). Toxoplasma Gondii CDPK1 in Complex with Inhibitor Gxj-237 To Be Published.
Page generated: Fri Jul 26 19:15:32 2024

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