Chlorine in PDB 5wj8: Crystal Structure of Human Cadherin-23 EC13-14

Protein crystallography data

The structure of Crystal Structure of Human Cadherin-23 EC13-14, PDB code: 5wj8 was solved by F.Velez-Cortes, C.Conghui, P.De-La-Torre, M.Sotomayor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 71.17 / 1.86
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 74.712, 74.712, 213.507, 90.00, 90.00, 120.00
R / Rfree (%) 21.7 / 24.8

Other elements in 5wj8:

The structure of Crystal Structure of Human Cadherin-23 EC13-14 also contains other interesting chemical elements:

Potassium (K) 1 atom
Calcium (Ca) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Cadherin-23 EC13-14 (pdb code 5wj8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Cadherin-23 EC13-14, PDB code: 5wj8:

Chlorine binding site 1 out of 1 in 5wj8

Go back to Chlorine Binding Sites List in 5wj8
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Cadherin-23 EC13-14


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Cadherin-23 EC13-14 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1605

b:63.3
occ:0.50
O A:HOH1776 3.3 56.8 1.0
N A:ARG1311 3.4 40.6 1.0
CB A:ARG1311 3.9 41.5 1.0
O A:ARG1311 4.0 39.2 1.0
CA A:ARG1311 4.1 40.6 1.0
C A:VAL1310 4.3 41.0 1.0
CA A:VAL1310 4.3 42.0 1.0
OE2 A:GLU1308 4.5 44.9 1.0
C A:ARG1311 4.5 39.9 1.0
CB A:VAL1310 4.8 45.2 1.0

Reference:

A.Jaiganesh, P.De-La-Torre, A.A.Patel, D.J.Termine, F.Velez-Cortes, C.Chen, M.Sotomayor. Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness. Structure V. 26 1210 2018.
ISSN: ISSN 1878-4186
PubMed: 30033219
DOI: 10.1016/J.STR.2018.06.003
Page generated: Sat Dec 12 12:36:49 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy