Chlorine in PDB 5wo3: Chaperone Spy Bound to IM7 (IM7 Un-Modeled)

The structure of Chaperone Spy Bound to IM7 (IM7 Un-Modeled), PDB code: 5wo3 was solved by S.Horowitz, P.Koldewey, R.Martin, J.C.A.Bardwell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.21 / 1.87
Space group	P 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	43.150, 43.150, 260.159, 90.00, 90.00, 90.00
R / Rfree (%)	21.9 / 25.3

The structure of Chaperone Spy Bound to IM7 (IM7 Un-Modeled) also contains other interesting chemical elements:

Zinc

(Zn)

13 atoms

The binding sites of Chlorine atom in the Chaperone Spy Bound to IM7 (IM7 Un-Modeled) (pdb code 5wo3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Chaperone Spy Bound to IM7 (IM7 Un-Modeled), PDB code: 5wo3:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Chaperone Spy Bound to IM7 (IM7 Un-Modeled)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Chaperone Spy Bound to IM7 (IM7 Un-Modeled) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl205 b:54.2 occ:1.00 ZN A:ZN201 2.3 29.6 1.0 HN1 A:IMD210 2.8 40.0 1.0 HA B:ARG62 3.0 42.5 1.0 HD1 A:PHE119 3.0 41.0 1.0 HE1 A:PHE119 3.1 41.0 1.0 O B:HOH324 3.2 44.3 1.0 O B:HOH310 3.2 52.0 1.0 HB2 B:HIS65 3.2 40.7 1.0 HG2 B:ARG61 3.2 49.3 1.0 OE2 A:GLU120 3.3 34.5 1.0 N1 A:IMD210 3.4 33.4 1.0 H2 A:IMD210 3.5 32.3 1.0 CD1 A:PHE119 3.7 34.2 1.0 CE1 A:PHE119 3.7 34.2 1.0 ND1 B:HIS65 3.7 35.8 1.0 CA B:ARG62 3.8 35.4 1.0 C2 A:IMD210 3.8 26.9 1.0 O B:ARG61 3.9 38.7 1.0 HE B:ARG62 3.9 57.4 1.0 N B:ARG62 3.9 35.7 1.0 CB B:HIS65 3.9 34.0 1.0 CD A:GLU120 4.0 43.5 1.0 OE1 A:GLU120 4.0 41.1 1.0 HB3 B:HIS65 4.0 40.7 1.0 C B:ARG61 4.0 44.3 1.0 HA A:GLU120 4.1 45.6 1.0 HB3 B:ARG61 4.1 47.2 1.0 HB2 B:ARG62 4.1 50.2 1.0 CG B:ARG61 4.1 41.1 1.0 CG B:HIS65 4.2 34.3 1.0 H B:ARG62 4.3 42.8 1.0 HH21 B:ARG62 4.3 59.1 1.0 HG3 B:ARG62 4.4 58.4 1.0 HD3 B:ARG61 4.5 62.4 1.0 CB B:ARG62 4.5 41.8 1.0 C5 A:IMD210 4.5 36.3 1.0 CB B:ARG61 4.6 39.3 1.0 HE B:ARG61 4.6 58.6 1.0 NE B:ARG62 4.6 47.9 1.0 CD B:ARG61 4.7 52.0 1.0 CE1 B:HIS65 4.8 34.0 1.0 HG3 B:ARG61 4.8 49.3 1.0 NE B:ARG61 4.8 48.8 1.0 H B:HIS65 4.8 40.5 1.0 O A:PHE119 4.8 41.8 1.0 CG B:ARG62 4.9 48.7 1.0 O A:HOH354 4.9 36.7 1.0 C B:ARG62 4.9 42.9 1.0 H5 A:IMD210 5.0 43.5 1.0 CA B:ARG61 5.0 47.4 1.0 N3 A:IMD210 5.0 32.8 1.0 CG A:PHE119 5.0 33.6 1.0 CA A:GLU120 5.0 38.0 1.0

Chlorine binding site 2 out of 2 in the Chaperone Spy Bound to IM7 (IM7 Un-Modeled)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Chaperone Spy Bound to IM7 (IM7 Un-Modeled) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl206 b:58.9 occ:1.00 ZN A:ZN208 2.2 23.9 1.0 HN3 B:IMD202 2.8 28.3 1.0 N3 B:IMD202 3.4 23.6 1.0 H4 B:IMD202 3.5 40.8 1.0 C4 B:IMD202 3.7 34.0 1.0 C2 B:IMD202 4.5 28.4 1.0 H2 B:IMD202 4.8 34.1 1.0 C5 B:IMD202 4.9 34.6 1.0

S.Horowitz, L.Salmon, P.Koldewey, L.S.Ahlstrom, R.Martin, S.Quan, P.V.Afonine, H.Van Den Bedem, L.Wang, Q.Xu, R.C.Trievel, C.L.Brooks, J.C.Bardwell. Visualizing Chaperone-Assisted Protein Folding. Nat. Struct. Mol. Biol. V. 23 691 2016.
ISSN: ESSN 1545-9985
PubMed: 27239796
DOI: 10.1038/NSMB.3237