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Chlorine in PDB 5wu1: Crystal Structure of Apo Human TUT1, Form I

Enzymatic activity of Crystal Structure of Apo Human TUT1, Form I

All present enzymatic activity of Crystal Structure of Apo Human TUT1, Form I:
2.7.7.19; 2.7.7.52;

Protein crystallography data

The structure of Crystal Structure of Apo Human TUT1, Form I, PDB code: 5wu1 was solved by S.Yamashita, K.Tomita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.98 / 2.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 77.630, 87.780, 185.070, 90.00, 90.00, 90.00
R / Rfree (%) 25.3 / 29.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Apo Human TUT1, Form I (pdb code 5wu1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Apo Human TUT1, Form I, PDB code: 5wu1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5wu1

Go back to Chlorine Binding Sites List in 5wu1
Chlorine binding site 1 out of 2 in the Crystal Structure of Apo Human TUT1, Form I


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Apo Human TUT1, Form I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1001

b:76.1
occ:1.00
NE1 A:TRP505 3.3 53.8 1.0
NH1 A:ARG445 3.6 72.6 1.0
CB A:ALA501 4.1 48.1 1.0
CD1 A:TRP505 4.2 50.6 1.0
NH2 A:ARG445 4.2 56.2 1.0
CE2 A:TRP505 4.3 54.5 1.0
CZ A:ARG445 4.4 62.6 1.0
CA A:ALA501 4.5 49.0 1.0
CZ2 A:TRP505 4.6 59.9 1.0
OG A:SER504 4.9 65.0 1.0

Chlorine binding site 2 out of 2 in 5wu1

Go back to Chlorine Binding Sites List in 5wu1
Chlorine binding site 2 out of 2 in the Crystal Structure of Apo Human TUT1, Form I


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Apo Human TUT1, Form I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1001

b:70.1
occ:1.00
NE1 B:TRP505 3.3 63.9 1.0
NH1 B:ARG445 3.5 50.6 1.0
CB B:ALA501 4.0 42.6 1.0
CD1 B:TRP505 4.1 58.5 1.0
NH2 B:ARG445 4.3 46.2 1.0
CE2 B:TRP505 4.3 62.2 1.0
CZ B:ARG445 4.4 51.5 1.0
CA B:ALA501 4.5 53.0 1.0
CZ2 B:TRP505 4.6 65.6 1.0

Reference:

S.Yamashita, Y.Takagi, T.Nagaike, K.Tomita. Crystal Structures of U6 Snrna-Specific Terminal Uridylyltransferase Nat Commun V. 8 15788 2017.
ISSN: ESSN 2041-1723
PubMed: 28589955
DOI: 10.1038/NCOMMS15788
Page generated: Fri Jul 26 20:41:40 2024

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