Chlorine in PDB 5x0v: Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus

The structure of Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus, PDB code: 5x0v was solved by I.Jo, N.-C.Ha, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.74 / 1.60
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	70.204, 138.348, 97.473, 90.00, 90.00, 90.00
R / Rfree (%)	15.9 / 19.2

The binding sites of Chlorine atom in the Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus (pdb code 5x0v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus, PDB code: 5x0v:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:17.0 occ:1.00 O A:HOH631 2.8 15.3 1.0 OG1 A:THR136 2.9 9.4 1.0 N A:THR136 3.2 6.9 1.0 N A:CYS206 3.4 9.0 1.0 O A:GLU204 3.5 17.1 1.0 O A:HOH529 3.6 10.9 1.0 CA A:HIS205 3.7 7.8 1.0 SG A:CYS206 3.7 11.9 1.0 CG2 A:ILE105 3.7 4.9 1.0 CA A:THR135 3.8 7.1 1.0 CB A:THR136 3.8 7.3 1.0 CB A:THR135 3.9 12.6 1.0 CB A:ILE105 3.9 2.9 1.0 C A:THR135 4.0 6.1 1.0 CG2 A:THR135 4.0 11.9 1.0 C A:HIS205 4.0 10.4 1.0 CA A:THR136 4.1 5.4 1.0 CB A:CYS206 4.2 9.1 1.0 CD1 A:ILE105 4.4 7.9 1.0 C A:GLU204 4.4 13.0 1.0 CA A:CYS206 4.4 9.2 1.0 N A:HIS205 4.5 9.7 1.0 CD A:PRO106 4.6 7.8 1.0 CB A:HIS205 4.6 7.3 1.0 O A:HOH564 4.7 10.4 1.0 ND1 A:HIS205 4.7 12.8 1.0 CG1 A:ILE105 4.8 7.7 1.0 O A:HOH620 4.9 8.7 1.0

Chlorine binding site 2 out of 2 in the Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Reduced Form of Regulatory Domain of OXYR2 From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl402 b:18.3 occ:1.00 OG1 B:THR136 3.0 11.3 1.0 O B:HOH596 3.0 20.0 1.0 N B:THR136 3.2 10.1 1.0 N B:CYS206 3.3 13.7 1.0 O B:GLU204 3.5 16.4 1.0 CG2 B:ILE105 3.6 8.0 1.0 SG B:CYS206 3.7 15.6 1.0 O B:HOH536 3.7 13.8 1.0 CA B:HIS205 3.7 9.8 1.0 CA B:THR135 3.7 6.3 1.0 CB B:THR135 3.8 9.9 1.0 CB B:THR136 3.8 11.2 1.0 CB B:ILE105 3.9 5.2 1.0 CG2 B:THR135 3.9 11.9 1.0 C B:THR135 4.0 7.4 1.0 C B:HIS205 4.0 13.2 1.0 CA B:THR136 4.1 8.0 1.0 CB B:CYS206 4.2 11.9 1.0 CD1 B:ILE105 4.3 13.0 1.0 CA B:CYS206 4.4 14.1 1.0 C B:GLU204 4.4 13.2 1.0 CD B:PRO106 4.5 9.1 1.0 N B:HIS205 4.5 11.0 1.0 CB B:HIS205 4.6 9.2 1.0 ND1 B:HIS205 4.7 13.6 1.0 CG1 B:ILE105 4.7 9.2 1.0 O B:HOH575 4.8 13.1 1.0 O B:HOH587 4.8 12.7 1.0 CG B:HIS205 5.0 10.4 1.0

I.Jo, D.Kim, Y.-J.Bang, J.Ahn, S.H.Choi, N.-C.Ha. The Hydrogen Peroxide Hypersensitivity of OXYR2 in Vibrio Vulnificus Depends on Conformational Constraints J. Biol. Chem. V. 292 7223 2017.
ISSN: ESSN 1083-351X
PubMed: 28264933
DOI: 10.1074/JBC.M116.743765