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Chlorine in PDB 5xgo: The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera

Enzymatic activity of The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera

All present enzymatic activity of The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera:
1.16.3.1;

Protein crystallography data

The structure of The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera, PDB code: 5xgo was solved by T.A.Cornell, Y.Srivastava, R.Jauch, R.Fan, B.P.Orner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.76 / 1.99
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 103.139, 104.723, 207.756, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 20.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera (pdb code 5xgo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera, PDB code: 5xgo:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5xgo

Go back to Chlorine Binding Sites List in 5xgo
Chlorine binding site 1 out of 2 in the The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:35.0
occ:1.00
 NZ A:LYS105 3.8 34.7 1.0
OG A:SER106 4.0 38.0 1.0
N A:SER106 4.1 28.8 1.0
CE A:LYS105 4.1 36.2 1.0
CD A:LYS105 4.3 36.7 1.0
CB A:SER106 4.3 36.1 1.0
CA A:SER106 4.8 31.4 1.0
CG A:LYS105 4.8 37.6 1.0
CA A:LYS105 4.9 28.4 1.0
C A:LYS105 5.0 28.9 1.0

Chlorine binding site 2 out of 2 in 5xgo

Go back to Chlorine Binding Sites List in 5xgo
Chlorine binding site 2 out of 2 in the The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of A Maxi-/Mini-Ferritin Chimera within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl201

b:37.0
occ:1.00
 N H:SER106 3.9 26.0 1.0
CE H:LYS105 4.0 46.3 1.0
CB H:SER106 4.0 28.3 1.0
NZ H:LYS105 4.1 46.1 1.0
CA H:LYS105 4.5 30.7 1.0
CD H:LYS105 4.5 45.2 1.0
CG H:LYS105 4.5 42.2 1.0
CA H:SER106 4.6 27.3 1.0
C H:LYS105 4.7 29.4 1.0
CB H:LYS105 5.0 34.4 1.0

Reference:

T.A.Cornell, Y.Srivastava, R.Jauch, R.Fan, B.P.Orner. The Crystal Structure of A Maxi/Mini-Ferritin Chimera Reveals Guiding Principles For the Assembly of Protein Cages. Biochemistry V. 56 3894 2017.
ISSN: ISSN 1520-4995
PubMed: 28682051
DOI: 10.1021/ACS.BIOCHEM.7B00312
Page generated: Fri Jul 26 20:54:56 2024

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