Chlorine in PDB 5xlj: Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432

The structure of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432, PDB code: 5xlj was solved by S.Y.Cho, W.S.Song, H.J.Hong, S.I.Yoon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.90
Space group	P 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	120.386, 120.386, 120.386, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 20.8

The structure of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 (pdb code 5xlj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432, PDB code: 5xlj:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl301 b:20.4 occ:1.00 NZ A:LYS192 3.0 18.5 1.0 O A:HOH502 3.3 38.9 1.0 CE A:LYS192 3.7 20.9 1.0 O A:HOH433 4.5 16.8 1.0 OD1 A:ASN190 5.0 19.1 1.0

Chlorine binding site 2 out of 5 in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:25.8 occ:1.00 O A:HOH451 3.1 32.4 1.0 N A:GLY165 3.1 11.6 1.0 O A:HOH526 3.2 23.2 1.0 C A:LYS163 3.5 13.7 1.0 CA A:GLY165 3.6 11.9 1.0 CA A:LYS163 3.7 14.4 1.0 O A:LYS163 3.7 13.4 1.0 N A:ALA164 3.8 12.7 1.0 CB A:LYS163 4.0 16.1 1.0 OG A:SER185 4.0 19.7 1.0 C A:ALA164 4.3 11.9 1.0 C A:GLY165 4.4 11.2 1.0 N A:VAL166 4.5 11.2 1.0 CB A:SER185 4.5 14.7 1.0 O A:HOH538 4.6 39.9 1.0 O A:HOH415 4.6 17.3 1.0 CA A:ALA164 4.6 12.3 1.0 CG A:LYS163 4.7 20.4 1.0 O A:VAL166 4.7 11.8 1.0 O A:HOH442 4.9 30.7 1.0 NA A:NA306 4.9 19.9 1.0

Chlorine binding site 3 out of 5 in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:28.6 occ:0.50 NE2 A:GLN221 3.2 14.9 1.0 O A:HOH541 3.6 42.4 1.0 O A:HOH413 3.7 31.5 1.0 CB A:ALA224 4.0 14.8 1.0 CD A:GLN221 4.2 14.2 1.0 OE1 A:GLN221 4.4 14.1 1.0 CA A:ALA224 4.8 13.2 1.0

Chlorine binding site 4 out of 5 in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl304 b:28.7 occ:1.00 N A:LEU101 3.3 17.8 1.0 NE2 A:GLN226 3.4 19.2 1.0 CE A:LYS258 3.5 36.8 1.0 CA A:LYS100 3.9 20.4 1.0 CB A:LEU101 4.1 19.3 1.0 C A:LYS100 4.1 18.2 1.0 O A:LEU101 4.2 17.6 1.0 CA A:LEU101 4.2 17.4 1.0 CG A:LEU101 4.4 22.6 1.0 CG A:LYS258 4.5 31.2 1.0 NZ A:LYS258 4.5 40.5 1.0 CB A:LYS100 4.5 20.4 1.0 CD A:LYS258 4.5 35.0 1.0 CD A:GLN226 4.6 24.2 1.0 CG A:LYS100 4.7 25.9 1.0 C A:LEU101 4.7 17.1 1.0 OE1 A:GLN103 4.7 24.4 1.0 CD1 A:LEU101 4.9 26.5 1.0 O A:ASN99 4.9 24.7 1.0

Chlorine binding site 5 out of 5 in the Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl305 b:31.2 occ:1.00 O A:HOH410 3.0 27.2 1.0 N A:ILE170 3.2 16.0 1.0 NH1 A:ARG156 3.3 22.7 1.0 CD A:ARG156 3.6 18.7 1.0 CA A:SER169 3.7 15.3 1.0 CB A:SER169 4.0 16.5 1.0 C A:SER169 4.0 15.6 1.0 CZ A:ARG156 4.1 23.6 1.0 CB A:ILE170 4.2 17.9 1.0 CA A:ILE170 4.2 16.5 1.0 O A:ILE170 4.2 17.5 1.0 NE A:ARG156 4.2 19.1 1.0 CG1 A:ILE170 4.6 18.9 1.0 C A:ILE170 4.7 16.8 1.0 CG A:ARG156 4.8 14.6 1.0 O A:HOH535 4.9 32.6 1.0 O A:ALA168 4.9 13.4 1.0

S.Y.Cho, W.S.Song, H.J.Hong, G.S.Lee, S.G.Kang, H.J.Ko, P.H.Kim, S.I.Yoon. Tetrameric Structure of the Flagellar Cap Protein Flid From Serratia Marcescens. Biochem. Biophys. Res. V. 489 63 2017COMMUN..
ISSN: ESSN 1090-2104
PubMed: 28527888
DOI: 10.1016/J.BBRC.2017.05.093