Chlorine in PDB 5y65: Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2

Enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2

All present enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2:
5.4.2.11; 5.4.2.4;

Protein crystallography data

The structure of Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2, PDB code: 5y65 was solved by L.L.Jiang, L.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.90 / 2.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.193, 82.929, 99.797, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 24.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2 (pdb code 5y65). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2, PDB code: 5y65:

Chlorine binding site 1 out of 1 in 5y65

Go back to Chlorine Binding Sites List in 5y65
Chlorine binding site 1 out of 1 in the Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:25.2
occ:1.00
NH2 C:ARG83 2.9 19.6 1.0
NE1 B:TRP68 3.3 17.7 1.0
NE1 C:TRP68 3.3 19.5 1.0
NH2 B:ARG83 3.4 15.6 1.0
NH1 B:ARG83 3.4 20.3 1.0
NH1 C:ARG83 3.6 22.5 1.0
CZ C:ARG83 3.7 21.0 1.0
CZ B:ARG83 3.9 20.7 1.0
CG2 B:VAL81 4.0 21.1 1.0
CG2 C:VAL81 4.0 18.9 1.0
CE2 B:TRP68 4.0 18.3 1.0
CB B:VAL81 4.1 23.6 1.0
CE2 C:TRP68 4.1 22.2 1.0
CB C:VAL81 4.2 20.1 1.0
CD1 B:TRP68 4.2 20.3 1.0
CD1 C:TRP68 4.3 21.2 1.0
CZ2 B:TRP68 4.3 20.1 1.0
CG1 B:VAL81 4.3 22.4 1.0
CZ2 C:TRP68 4.3 18.2 1.0
CG1 C:VAL81 4.4 16.0 1.0
NE C:ARG83 5.0 17.9 1.0

Reference:

L.L.Jiang, L.Zhou. Phosphoglycerate Mutase 1 Complexed with A Small Molecule Inhibitor KH2 To Be Published.
Page generated: Sat Dec 12 12:40:14 2020

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