Chlorine in PDB 5ydv: Regulatory Domain of Hypt From Salmonella Typhimurium Complexed with Hocl (Hocl-Bound Form)

The structure of Regulatory Domain of Hypt From Salmonella Typhimurium Complexed with Hocl (Hocl-Bound Form), PDB code: 5ydv was solved by I.Jo, S.Hong, J.Ahn, N.C.Ha, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.48 / 1.75
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	63.293, 63.293, 101.438, 90.00, 90.00, 90.00
R / Rfree (%)	20.9 / 25.3

The binding sites of Chlorine atom in the Regulatory Domain of Hypt From Salmonella Typhimurium Complexed with Hocl (Hocl-Bound Form) (pdb code 5ydv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Regulatory Domain of Hypt From Salmonella Typhimurium Complexed with Hocl (Hocl-Bound Form), PDB code: 5ydv:

Chlorine binding site 1 out of 1 in the Regulatory Domain of Hypt From Salmonella Typhimurium Complexed with Hocl (Hocl-Bound Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Regulatory Domain of Hypt From Salmonella Typhimurium Complexed with Hocl (Hocl-Bound Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:40.8 occ:1.00 CL1 A:8TR401 0.0 40.8 1.0 O1 A:8TR401 1.7 28.6 1.0 OG A:SER110 3.2 67.0 1.0 CG A:MET206 3.3 31.2 1.0 N A:TYR205 3.4 19.7 1.0 N A:MET206 3.5 17.0 1.0 CB A:SER204 3.7 27.7 1.0 CB A:TYR205 3.9 26.6 1.0 CA A:TYR205 4.0 25.6 1.0 CE2 A:TYR154 4.1 35.6 1.0 CB A:MET206 4.2 21.3 1.0 C A:SER204 4.2 21.2 1.0 CA A:SER204 4.2 29.8 1.0 CB A:SER110 4.2 60.2 1.0 C A:TYR205 4.3 17.7 1.0 CA A:MET206 4.5 14.2 1.0 OG A:SER204 4.5 30.4 1.0 CD2 A:TYR154 4.6 38.4 1.0 SD A:MET206 4.7 32.3 1.0 N A:SER110 4.9 37.7 1.0 CG1 A:VAL136 4.9 43.8 1.0 CB A:ALA108 4.9 21.9 1.0 CZ A:TYR154 5.0 37.5 1.0

I.Jo, D.Kim, T.No, S.Hong, J.Ahn, S.Ryu, N.C.Ha. Structural Basis For Hocl Recognition and Regulation Mechanisms of Hypt, A Hypochlorite-Specific Transcriptional Regulator. Proc. Natl. Acad. Sci. V. 116 3740 2019U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30733296
DOI: 10.1073/PNAS.1811509116