Chlorine in PDB 5yg1: Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704

All present enzymatic activity of Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704:
2.1.2.1;

The structure of Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704, PDB code: 5yg1 was solved by P.Chitnumsub, A.Jaruwat, U.Leartsakulpanich, G.Schwertz, F.Diederich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.45
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	101.471, 58.632, 234.636, 90.00, 90.00, 90.00
R / Rfree (%)	22.5 / 29.4

The structure of Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704 also contains other interesting chemical elements:

Fluorine

(F)

9 atoms

The binding sites of Chlorine atom in the Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704 (pdb code 5yg1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704, PDB code: 5yg1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl503 b:30.8 occ:1.00 ND2 A:ASN276 3.1 19.8 1.0 ND2 B:ASN276 3.3 19.1 1.0 NZ B:LYS277 3.3 19.9 1.0 NZ A:LYS277 3.4 22.4 1.0 CG A:ASN276 4.0 20.1 1.0 CE B:LYS277 4.1 19.7 1.0 OD1 A:ASN276 4.1 20.1 1.0 CG B:ASN276 4.3 19.6 1.0 CE A:LYS277 4.3 22.4 1.0 CG B:LYS277 4.3 20.0 1.0 CD2 B:LEU46 4.4 30.9 1.0 CG A:LYS277 4.4 22.1 1.0 OD1 B:ASN276 4.4 18.9 1.0 CD2 A:LEU46 4.5 28.6 1.0 CD B:LYS277 4.9 20.2 1.0 ND1 A:HIS274 4.9 21.1 1.0

Chlorine binding site 2 out of 2 in the Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Plasmodium Vivax Shmt Bound with Plp-Glycine and GS704 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl503 b:20.4 occ:0.50 ND2 C:ASN276 3.1 22.1 1.0 NZ C:LYS277 3.9 21.0 1.0 CG C:ASN276 4.1 21.9 1.0 OD1 C:ASN276 4.1 21.8 1.0 CE C:LYS277 4.4 21.5 1.0 ND1 C:HIS274 4.6 19.9 1.0 CG C:LYS277 4.8 21.4 1.0

P.Chitnumsub, A.Jaruwat. To Be Published To Be Published.