Chlorine in PDB 5yhe: The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt

Protein crystallography data

The structure of The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt, PDB code: 5yhe was solved by L.Song, Q.Ji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.78 / 2.47
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 42.605, 76.659, 85.673, 90.68, 91.25, 104.57
R / Rfree (%) 16.1 / 23.5

Other elements in 5yhe:

The structure of The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt also contains other interesting chemical elements:

Cobalt (Co) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt (pdb code 5yhe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt, PDB code: 5yhe:

Chlorine binding site 1 out of 1 in 5yhe

Go back to Chlorine Binding Sites List in 5yhe
Chlorine binding site 1 out of 1 in the The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Cobalt within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:63.6
occ:1.00
NE A:ARG316 3.4 36.5 1.0
NE2 A:HIS279 3.8 34.2 1.0
NH2 A:ARG316 4.0 42.2 1.0
CB A:GLN275 4.1 34.2 1.0
CZ A:ARG316 4.2 39.2 1.0
CD A:ARG316 4.2 30.9 1.0
OE1 A:GLN275 4.3 47.8 1.0
CD A:GLN275 4.3 38.4 1.0
CD1 A:LEU326 4.4 36.1 1.0
NE2 A:GLN275 4.5 39.2 1.0
O A:HOH889 4.5 39.1 1.0
CD2 A:HIS279 4.6 37.1 1.0
CG A:GLN275 4.6 35.6 1.0
CG A:ARG316 4.7 35.5 1.0
CE1 A:HIS279 4.8 36.8 1.0
CD2 A:LEU326 4.9 28.9 1.0

Reference:

L.Song, Y.Zhang, W.Chen, T.Gu, S.Y.Zhang, Q.Ji. Mechanistic Insights Into Staphylopine-Mediated Metal Acquisition Proc. Natl. Acad. Sci. V. 115 3942 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29581261
DOI: 10.1073/PNAS.1718382115
Page generated: Sat Dec 12 12:40:48 2020

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