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Chlorine in PDB 5yiy: Crystal Structure of D175A Mutant of RV3272 From Mycobacterium Tuberculosis

Protein crystallography data

The structure of Crystal Structure of D175A Mutant of RV3272 From Mycobacterium Tuberculosis, PDB code: 5yiy was solved by S.S.Karade, J.V.Pratap, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.12 / 2.50
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.678, 78.678, 251.475, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 23.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of D175A Mutant of RV3272 From Mycobacterium Tuberculosis (pdb code 5yiy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of D175A Mutant of RV3272 From Mycobacterium Tuberculosis, PDB code: 5yiy:

Chlorine binding site 1 out of 1 in 5yiy

Go back to Chlorine Binding Sites List in 5yiy
Chlorine binding site 1 out of 1 in the Crystal Structure of D175A Mutant of RV3272 From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of D175A Mutant of RV3272 From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:70.9
occ:1.00
OD1 B:ASP348 2.4 65.5 1.0
OD2 B:ASP348 2.4 63.3 1.0
CG B:ASP348 2.7 60.0 1.0
CB B:ASP348 4.2 51.8 1.0
O B:GLU346 4.3 36.7 1.0
O B:ALA345 4.8 36.7 1.0

Reference:

S.S.Karade, S.Pandey, A.Ansari, S.Das, S.Tripathi, A.Arora, S.Chopra, J.V.Pratap, A.Dasgupta. RV3272 Encodes A Novel Family III Coa Transferase That Alters the Cell Wall Lipid Profile and Protects Mycobacteria From Acidic and Oxidative Stress. Biochim Biophys Acta V.1867 317 2019PROTEINS Proteom.
ISSN: ISSN 1878-1454
PubMed: 30342240
DOI: 10.1016/J.BBAPAP.2018.10.011
Page generated: Fri Jul 26 21:26:06 2024

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