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Chlorine in PDB 5ypj: Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant).

Enzymatic activity of Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant).

All present enzymatic activity of Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant).:
3.4.11.18;

Protein crystallography data

The structure of Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant)., PDB code: 5ypj was solved by C.B.Sandeep, A.Addlagatta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.63 / 2.01
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.285, 48.536, 56.353, 90.00, 95.00, 90.00
R / Rfree (%) 15.9 / 20.8

Other elements in 5ypj:

The structure of Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant). also contains other interesting chemical elements:

Cobalt (Co) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant). (pdb code 5ypj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant)., PDB code: 5ypj:

Chlorine binding site 1 out of 1 in 5ypj

Go back to Chlorine Binding Sites List in 5ypj
Chlorine binding site 1 out of 1 in the Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:47.5
occ:1.00
 O A:HOH416 2.5 21.3 1.0
N A:ARG16 2.9 29.9 1.0
NZ A:LYS102 3.0 27.4 1.0
O A:PRO101 3.0 23.9 1.0
CE A:LYS102 3.4 27.7 1.0
CD A:LYS102 3.5 27.6 1.0
CA A:THR15 3.5 32.9 1.0
C A:THR15 3.6 31.8 1.0
CD1 A:LEU95 3.7 21.2 1.0
CG A:ARG16 3.7 35.9 1.0
CB A:ARG16 3.8 37.0 1.0
CA A:LYS102 3.9 22.3 1.0
CA A:ARG16 3.9 31.7 1.0
O A:PRO14 3.9 35.6 1.0
C A:PRO101 4.1 22.3 1.0
CG2 A:THR15 4.3 33.2 1.0
CG A:LYS102 4.4 26.2 1.0
N A:THR15 4.4 36.1 1.0
N A:LYS102 4.5 20.5 1.0
CB A:THR15 4.5 31.7 1.0
OD2 A:ASP78 4.5 26.5 1.0
C A:PRO14 4.6 36.1 1.0
O A:ARG16 4.6 31.4 1.0
CB A:LYS102 4.6 25.4 1.0
C A:LYS102 4.7 21.8 1.0
OG A:SER103 4.7 19.8 1.0
NH1 A:ARG16 4.7 37.7 1.0
CD A:ARG16 4.7 37.7 1.0
C A:ARG16 4.8 32.0 1.0
O A:THR15 4.8 36.2 1.0
N A:SER103 4.8 21.0 1.0
CD2 A:LEU95 4.9 23.8 1.0
CG A:LEU95 4.9 21.4 1.0

Reference:

C.B.Sandeep, A.Addlagatta. Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant). To Be Published.
Page generated: Sat Jul 12 11:00:52 2025

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