Chlorine in PDB 5yro: RANL182A in Complex with RANBP1-CRM1

The structure of RANL182A in Complex with RANBP1-CRM1, PDB code: 5yro was solved by Q.Sun, Y.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.53 / 2.40
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	105.259, 105.259, 307.425, 90.00, 90.00, 90.00
R / Rfree (%)	20.7 / 24.5

The structure of RANL182A in Complex with RANBP1-CRM1 also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Chlorine atom in the RANL182A in Complex with RANBP1-CRM1 (pdb code 5yro). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the RANL182A in Complex with RANBP1-CRM1, PDB code: 5yro:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the RANL182A in Complex with RANBP1-CRM1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of RANL182A in Complex with RANBP1-CRM1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1102 b:0.7 occ:1.00 O C:HOH1211 3.2 49.0 1.0 N C:GLU1009 3.3 60.8 1.0 CB C:GLU1009 3.6 64.2 0.6 CB C:GLU1009 3.6 64.5 0.4 N C:SER1008 3.7 61.8 1.0 CB C:THR1007 3.8 57.7 1.0 CB C:SER1008 4.0 60.2 1.0 CA C:GLU1009 4.0 63.2 0.6 CA C:GLU1009 4.1 63.2 0.4 O C:HOH1241 4.1 64.7 1.0 CA C:SER1008 4.2 61.3 1.0 C C:SER1008 4.2 59.9 1.0 OG1 C:THR1007 4.2 56.6 1.0 C C:THR1007 4.4 59.4 1.0 OG C:SER1008 4.5 63.0 1.0 CA C:THR1007 4.6 57.5 1.0 CG2 C:THR1007 4.6 56.0 1.0 OE2 C:GLU1009 4.9 67.3 0.6 CG C:GLU1009 4.9 66.8 0.6 CG C:GLU1009 5.0 66.7 0.4

Chlorine binding site 2 out of 4 in the RANL182A in Complex with RANBP1-CRM1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of RANL182A in Complex with RANBP1-CRM1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1103 b:0.7 occ:1.00 O C:LYS605 3.0 67.1 1.0 CB C:TYR608 3.4 70.4 1.0 N C:TYR608 3.4 67.9 1.0 C C:CYS606 3.4 73.5 1.0 CA C:CYS606 3.4 71.7 1.0 N C:LYS607 3.6 71.7 1.0 C C:LYS605 3.7 66.7 1.0 N C:CYS606 3.8 69.5 1.0 O C:CYS606 3.8 75.3 1.0 CE C:LYS567 4.0 70.4 1.0 CA C:TYR608 4.0 70.0 1.0 CD2 C:HIS609 4.2 76.1 1.0 C C:LYS607 4.4 70.6 1.0 CG C:LYS607 4.5 72.3 1.0 NZ C:LYS567 4.5 72.2 1.0 CD C:LYS567 4.5 67.0 1.0 CA C:LYS607 4.6 71.2 1.0 CG C:TYR608 4.6 73.8 1.0 N C:HIS609 4.6 71.4 1.0 NE2 C:HIS609 4.6 79.1 1.0 CB C:CYS606 4.8 71.4 1.0 CG C:LYS567 4.8 63.3 1.0 C C:TYR608 4.8 69.7 1.0 CD2 C:TYR608 4.9 74.7 1.0 CA C:LYS605 4.9 66.6 1.0

Chlorine binding site 3 out of 4 in the RANL182A in Complex with RANBP1-CRM1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of RANL182A in Complex with RANBP1-CRM1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1104 b:0.6 occ:1.00 OE1 C:GLN62 3.3 89.8 1.0 CB C:ASN113 3.5 79.2 1.0 CB C:PRO61 3.8 70.7 1.0 CG C:GLN62 3.9 77.3 1.0 ND2 C:ASN113 4.0 87.6 1.0 CG2 A:ILE81 4.0 52.7 1.0 CD C:GLN62 4.0 81.3 1.0 C C:PRO61 4.2 65.8 1.0 N C:LEU114 4.3 71.1 1.0 CG C:ASN113 4.3 83.8 1.0 N C:GLN62 4.4 61.3 1.0 O C:PRO61 4.4 68.3 1.0 CD2 C:PHE65 4.4 61.6 1.0 CA C:GLN62 4.5 66.3 1.0 CB C:LEU114 4.6 66.8 1.0 C C:ASN113 4.6 71.5 1.0 CA C:PRO61 4.6 71.6 1.0 CA C:ASN113 4.6 73.5 1.0 CD1 A:ILE81 4.7 57.5 1.0 CA C:LEU114 4.8 68.0 1.0 CB C:PHE65 4.8 60.3 1.0 CB C:GLN62 4.9 71.3 1.0 CG1 A:ILE81 4.9 54.2 1.0

Chlorine binding site 4 out of 4 in the RANL182A in Complex with RANBP1-CRM1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of RANL182A in Complex with RANBP1-CRM1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1105 b:99.5 occ:1.00 CD1 C:TYR228 3.7 70.3 1.0 CE1 C:TYR228 3.7 70.4 1.0 NH1 C:ARG227 3.8 81.1 1.0 CG2 C:THR232 4.5 77.1 1.0 CG C:TYR228 4.5 69.3 1.0 CZ C:TYR228 4.6 70.8 1.0 O C:ARG227 4.7 65.0 1.0 CA C:TYR228 4.7 67.6 1.0 CZ C:ARG227 4.8 84.4 1.0 CG C:ARG227 4.9 81.2 1.0 C C:ARG227 4.9 64.8 1.0 N C:TYR228 5.0 63.9 1.0

Q.Sun, Y.Zhang. RANL182A in Complex with RANBP1-CRM1 To Be Published.