Atomistry » Chlorine » PDB 5yka-5z2b » 5yz3
Atomistry »
  Chlorine »
    PDB 5yka-5z2b »
      5yz3 »

Chlorine in PDB 5yz3: Crystal Structure of T2R-Ttl-28 Complex

Protein crystallography data

The structure of Crystal Structure of T2R-Ttl-28 Complex, PDB code: 5yz3 was solved by Y.Yu, Q.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.62 / 2.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 104.887, 157.496, 180.904, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 23.4

Other elements in 5yz3:

The structure of Crystal Structure of T2R-Ttl-28 Complex also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Calcium (Ca) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of T2R-Ttl-28 Complex (pdb code 5yz3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of T2R-Ttl-28 Complex, PDB code: 5yz3:

Chlorine binding site 1 out of 1 in 5yz3

Go back to Chlorine Binding Sites List in 5yz3
Chlorine binding site 1 out of 1 in the Crystal Structure of T2R-Ttl-28 Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of T2R-Ttl-28 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl504

b:43.7
occ:1.00
O D:HOH625 2.3 52.4 1.0
O D:HOH635 2.9 42.4 1.0
HD13 D:ILE163 3.1 46.4 1.0
HA D:ASP161 3.6 55.2 1.0
HE D:ARG251 3.6 48.2 1.0
HD11 D:ILE163 3.7 46.4 1.0
CD1 D:ILE163 3.8 38.6 1.0
C D:ASP161 3.9 42.5 1.0
O C:HOH761 4.0 41.1 1.0
O D:ASP161 4.0 42.4 1.0
O D:ARG162 4.1 39.9 1.0
C D:ARG162 4.2 39.9 1.0
N D:ARG162 4.2 41.6 1.0
HZ3 C:TRP407 4.2 36.4 1.0
CA D:ASP161 4.2 46.0 1.0
HA D:ILE163 4.3 57.1 1.0
HD12 D:ILE163 4.4 46.4 1.0
O D:PRO160 4.4 51.1 1.0
NE D:ARG251 4.5 40.2 1.0
HH11 D:ARG251 4.5 67.0 1.0
H D:ARG162 4.5 49.9 1.0
HA D:ARG162 4.5 49.7 1.0
N D:ILE163 4.6 42.1 1.0
CA D:ARG162 4.6 41.4 1.0
HG12 D:ILE163 4.7 48.2 1.0
O C:HOH611 4.7 43.7 1.0
OD1 D:ASP197 4.7 44.7 1.0
OD2 D:ASP197 4.8 41.5 1.0
HD3 D:ARG251 4.9 43.7 1.0
CG1 D:ILE163 4.9 40.1 1.0
HG3 D:ARG251 4.9 39.7 1.0
CA D:ILE163 4.9 47.6 1.0
HH22 D:ARG156 4.9 59.8 1.0
H D:ILE163 5.0 50.5 1.0

Reference:

N.Ning, Y.Yu, M.Wu, R.Zhang, T.Zhang, C.Zhu, L.Huang, C.H.Yun, C.H.Benes, J.Zhang, X.Deng, Q.Chen, R.Ren. A Novel Microtubule Inhibitor Overcomes Multidrug Resistance in Tumors. Cancer Res. V. 78 5949 2018.
ISSN: ESSN 1538-7445
PubMed: 30135190
DOI: 10.1158/0008-5472.CAN-18-0455
Page generated: Fri Jul 26 21:36:43 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy