Chlorine in PDB 5z0s: Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor

Enzymatic activity of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor

All present enzymatic activity of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor:
2.7.10.1;

Protein crystallography data

The structure of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor, PDB code: 5z0s was solved by Q.Liu, Y.Xu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.80 / 2.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 210.130, 57.980, 65.360, 90.00, 107.38, 90.00
R / Rfree (%) 22.5 / 27.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor (pdb code 5z0s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor, PDB code: 5z0s:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5z0s

Go back to Chlorine Binding Sites List in 5z0s
Chlorine binding site 1 out of 2 in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl801

b:61.0
occ:1.00
CL1 A:960801 0.0 61.0 1.0
C17 A:960801 1.7 57.7 1.0
N16 A:960801 2.7 57.7 1.0
C18 A:960801 2.7 59.2 1.0
OD1 A:ASP641 3.2 41.3 1.0
C20 A:960801 3.6 37.4 1.0
N21 A:960801 3.6 39.3 1.0
CG A:ASP641 3.6 37.8 1.0
OD2 A:ASP641 3.8 44.0 1.0
CB A:PHE489 3.9 44.6 1.0
C10 A:960801 3.9 36.0 1.0
N22 A:960801 4.0 34.0 1.0
C19 A:960801 4.0 55.0 1.0
N12 A:960801 4.0 64.1 1.0
CB A:ALA640 4.1 28.5 1.0
C24 A:960801 4.1 35.9 1.0
C23 A:960801 4.1 35.3 1.0
CD2 A:PHE489 4.2 54.3 1.0
CG A:PHE489 4.2 50.9 1.0
C06 A:960801 4.4 44.3 1.0
C13 A:960801 4.6 59.7 1.0
C01 A:960801 4.7 35.9 1.0
CB A:ASP641 4.7 35.1 1.0
CD1 A:LEU630 4.7 36.4 1.0
O A:PHE489 4.8 47.8 1.0
N A:ASP641 4.9 26.5 1.0

Chlorine binding site 2 out of 2 in 5z0s

Go back to Chlorine Binding Sites List in 5z0s
Chlorine binding site 2 out of 2 in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl801

b:55.1
occ:1.00
CL1 B:960801 0.0 55.1 1.0
C17 B:960801 1.7 50.1 1.0
N16 B:960801 2.6 49.3 1.0
C18 B:960801 2.8 43.9 1.0
C20 B:960801 3.4 38.7 1.0
C10 B:960801 3.6 38.5 1.0
N21 B:960801 3.6 36.3 1.0
OD2 B:ASP641 3.6 46.7 1.0
C23 B:960801 3.9 37.1 1.0
N22 B:960801 3.9 38.3 1.0
CB B:PHE489 3.9 46.6 1.0
OD1 B:ASP641 3.9 44.0 1.0
CG B:ASP641 4.0 41.7 1.0
C06 B:960801 4.0 43.3 1.0
N12 B:960801 4.0 57.1 1.0
C19 B:960801 4.0 43.9 1.0
CG B:PHE489 4.1 49.2 1.0
C01 B:960801 4.2 39.4 1.0
C24 B:960801 4.2 32.8 1.0
CD1 B:PHE489 4.3 55.0 1.0
CB B:ALA640 4.4 31.8 1.0
CD1 B:LEU630 4.5 32.8 1.0
C13 B:960801 4.6 53.5 1.0
CD2 B:PHE489 4.8 53.5 1.0

Reference:

A.Jiang, Q.Liu, R.Wang, P.Wei, Y.Dai, X.Wang, Y.Xu, Y.Ma, J.Ai, J.Shen, J.Ding, B.Xiong. Structure-Based Discovery of A Series of 5H-Pyrrolo[2,3-B]Pyrazine Fgfr Kinase Inhibitors Molecules V. 23 2018.
ISSN: ESSN 1420-3049
PubMed: 29562726
DOI: 10.3390/MOLECULES23030698
Page generated: Sat Dec 12 12:41:43 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy