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Chlorine in PDB 5z0s: Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor

Enzymatic activity of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor

All present enzymatic activity of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor:
2.7.10.1;

Protein crystallography data

The structure of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor, PDB code: 5z0s was solved by Q.Liu, Y.Xu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.80 / 2.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 210.130, 57.980, 65.360, 90.00, 107.38, 90.00
R / Rfree (%) 22.5 / 27.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor (pdb code 5z0s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor, PDB code: 5z0s:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5z0s

Go back to Chlorine Binding Sites List in 5z0s
Chlorine binding site 1 out of 2 in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl801

b:61.0
occ:1.00
CL1 A:960801 0.0 61.0 1.0
C17 A:960801 1.7 57.7 1.0
N16 A:960801 2.7 57.7 1.0
C18 A:960801 2.7 59.2 1.0
OD1 A:ASP641 3.2 41.3 1.0
C20 A:960801 3.6 37.4 1.0
N21 A:960801 3.6 39.3 1.0
CG A:ASP641 3.6 37.8 1.0
OD2 A:ASP641 3.8 44.0 1.0
CB A:PHE489 3.9 44.6 1.0
C10 A:960801 3.9 36.0 1.0
N22 A:960801 4.0 34.0 1.0
C19 A:960801 4.0 55.0 1.0
N12 A:960801 4.0 64.1 1.0
CB A:ALA640 4.1 28.5 1.0
C24 A:960801 4.1 35.9 1.0
C23 A:960801 4.1 35.3 1.0
CD2 A:PHE489 4.2 54.3 1.0
CG A:PHE489 4.2 50.9 1.0
C06 A:960801 4.4 44.3 1.0
C13 A:960801 4.6 59.7 1.0
C01 A:960801 4.7 35.9 1.0
CB A:ASP641 4.7 35.1 1.0
CD1 A:LEU630 4.7 36.4 1.0
O A:PHE489 4.8 47.8 1.0
N A:ASP641 4.9 26.5 1.0

Chlorine binding site 2 out of 2 in 5z0s

Go back to Chlorine Binding Sites List in 5z0s
Chlorine binding site 2 out of 2 in the Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of FGFR1 Kinase Domain in Complex with A Novel Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl801

b:55.1
occ:1.00
CL1 B:960801 0.0 55.1 1.0
C17 B:960801 1.7 50.1 1.0
N16 B:960801 2.6 49.3 1.0
C18 B:960801 2.8 43.9 1.0
C20 B:960801 3.4 38.7 1.0
C10 B:960801 3.6 38.5 1.0
N21 B:960801 3.6 36.3 1.0
OD2 B:ASP641 3.6 46.7 1.0
C23 B:960801 3.9 37.1 1.0
N22 B:960801 3.9 38.3 1.0
CB B:PHE489 3.9 46.6 1.0
OD1 B:ASP641 3.9 44.0 1.0
CG B:ASP641 4.0 41.7 1.0
C06 B:960801 4.0 43.3 1.0
N12 B:960801 4.0 57.1 1.0
C19 B:960801 4.0 43.9 1.0
CG B:PHE489 4.1 49.2 1.0
C01 B:960801 4.2 39.4 1.0
C24 B:960801 4.2 32.8 1.0
CD1 B:PHE489 4.3 55.0 1.0
CB B:ALA640 4.4 31.8 1.0
CD1 B:LEU630 4.5 32.8 1.0
C13 B:960801 4.6 53.5 1.0
CD2 B:PHE489 4.8 53.5 1.0

Reference:

A.Jiang, Q.Liu, R.Wang, P.Wei, Y.Dai, X.Wang, Y.Xu, Y.Ma, J.Ai, J.Shen, J.Ding, B.Xiong. Structure-Based Discovery of A Series of 5H-Pyrrolo[2,3-B]Pyrazine Fgfr Kinase Inhibitors Molecules V. 23 2018.
ISSN: ESSN 1420-3049
PubMed: 29562726
DOI: 10.3390/MOLECULES23030698
Page generated: Fri Jul 26 21:36:50 2024

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