Chlorine in PDB 5z5b: Crystal Structure of Tk-Ptp in the G95A Mutant Form

The structure of Crystal Structure of Tk-Ptp in the G95A Mutant Form, PDB code: 5z5b was solved by B.Ku, H.Y.Yun, S.J.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	77.40 / 2.30
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	154.796, 154.796, 75.240, 90.00, 90.00, 120.00
R / Rfree (%)	21.9 / 26.5

The binding sites of Chlorine atom in the Crystal Structure of Tk-Ptp in the G95A Mutant Form (pdb code 5z5b). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Tk-Ptp in the G95A Mutant Form, PDB code: 5z5b:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Tk-Ptp in the G95A Mutant Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Tk-Ptp in the G95A Mutant Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:42.6 occ:1.00 CD A:ARG146 3.2 40.3 1.0 NH1 A:ARG146 3.3 44.4 1.0 NE A:ARG146 4.1 42.3 1.0 CZ A:ARG146 4.2 43.9 1.0 CG A:ARG146 4.3 35.8 1.0 CB A:ARG146 4.4 31.7 1.0 CD1 A:LEU73 4.8 25.5 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Tk-Ptp in the G95A Mutant Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Tk-Ptp in the G95A Mutant Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl201 b:54.7 occ:1.00 CE2 B:TYR110 3.4 30.2 1.0 CZ B:TYR110 3.7 29.8 1.0 CD2 B:TYR110 3.9 28.3 1.0 O B:TYR110 3.9 23.8 1.0 OH B:TYR110 4.0 29.8 1.0 CE1 B:TYR110 4.3 31.1 1.0 CG B:TYR110 4.5 27.8 1.0 CD1 B:TYR110 4.7 29.4 1.0 OE1 B:GLU80 4.7 41.7 1.0 C B:TYR110 5.0 26.9 1.0

H.Y.Yun, J.Lee, H.Kim, H.Ryu, H.C.Shin, B.H.Oh, B.Ku, S.J.Kim. Structural Study Reveals the Temperature-Dependent Conformational Flexibility of Tk-Ptp, A Protein Tyrosine Phosphatase From Thermococcus Kodakaraensis KOD1 Plos One V. 13 97635 2018.
ISSN: ESSN 1932-6203
PubMed: 29791483
DOI: 10.1371/JOURNAL.PONE.0197635