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Chlorine in PDB 5zb4: Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8
Enzymatic activity of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8
All present enzymatic activity of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8:
2.7.4.9;
2.7.4.9;
Protein crystallography data
The structure of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8, PDB code: 5zb4
was solved by
S.K.Chaudhary,
J.Jeyakanthan,
K.Sekar,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.74 / 1.92 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 47.170, 47.474, 152.169, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 18.8 / 23.3 |
Other elements in 5zb4:
The structure of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8 also contains other interesting chemical elements:
| Calcium | (Ca) | 15 atoms |
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8
(pdb code 5zb4). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8, PDB code: 5zb4:
Jump to Chlorine binding site number: 1; 2; 3;
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8, PDB code: 5zb4:
Jump to Chlorine binding site number: 1; 2; 3;
Chlorine binding site 1 out of 3 in 5zb4
Go back to
Chlorine Binding Sites List in 5zb4
Chlorine binding site 1 out
of 3 in the Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8 within 5.0Å range:
|
Chlorine binding site 2 out of 3 in 5zb4
Go back to
Chlorine Binding Sites List in 5zb4
Chlorine binding site 2 out
of 3 in the Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8 within 5.0Å range:
|
Chlorine binding site 3 out of 3 in 5zb4
Go back to
Chlorine Binding Sites List in 5zb4
Chlorine binding site 3 out
of 3 in the Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Thymidylate Kinase in Complex with Adp and Tmp From Thermus Thermophilus HB8 within 5.0Å range:
|
Reference:
S.K.Chaudhary,
Y.Iyyappan,
M.Elayappan,
J.Jeyakanthan,
K.Sekar.
Insights Into Product Release Dynamics Through Structural Analyses of Thymidylate Kinase. Int. J. Biol. Macromol. V. 123 637 2018.
ISSN: ISSN 1879-0003
PubMed: 30447376
DOI: 10.1016/J.IJBIOMAC.2018.11.025
Page generated: Fri Jul 26 21:41:38 2024
ISSN: ISSN 1879-0003
PubMed: 30447376
DOI: 10.1016/J.IJBIOMAC.2018.11.025
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