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Chlorine in PDB 5znq: Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group).

Enzymatic activity of Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group).

All present enzymatic activity of Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group).:
2.4.2.7;

Protein crystallography data

The structure of Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group)., PDB code: 5znq was solved by G.C.Pavithra, U.A.Ramagopal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.83 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.685, 86.770, 48.688, 90.00, 104.83, 90.00
R / Rfree (%) 16.4 / 20.3

Other elements in 5znq:

The structure of Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group). also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group). (pdb code 5znq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group)., PDB code: 5znq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5znq

Go back to Chlorine Binding Sites List in 5znq
Chlorine binding site 1 out of 2 in the Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:29.9
occ:1.00
N A:ALA69 3.2 15.3 1.0
N A:ARG70 3.3 17.0 1.0
NH2 B:ARG90 3.3 18.7 1.0
NH1 B:ARG90 3.5 20.3 1.0
CG A:ARG70 3.5 18.3 0.5
CZ B:ARG90 3.8 18.5 1.0
CA A:ALA69 3.9 15.7 1.0
CB A:ALA69 3.9 16.1 1.0
C A:ALA69 4.0 16.1 1.0
CB A:ARG70 4.0 18.7 0.5
CB A:ARG70 4.0 17.9 0.5
C A:GLU68 4.2 15.3 1.0
CA A:ARG70 4.2 18.4 0.5
O A:GLU68 4.2 16.2 1.0
CA A:ARG70 4.2 18.1 0.5
O A:HOH338 4.3 16.1 1.0
CD A:ARG70 4.7 18.7 0.5
NH2 A:ARG70 4.7 19.4 0.5
NE A:ARG70 4.9 21.3 0.5

Chlorine binding site 2 out of 2 in 5znq

Go back to Chlorine Binding Sites List in 5znq
Chlorine binding site 2 out of 2 in the Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group). within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:29.8
occ:1.00
O B:HOH369 2.9 30.9 1.0
N B:ARG70 3.1 17.6 1.0
N B:ALA69 3.2 15.9 1.0
NH2 A:ARG90 3.3 17.8 1.0
NH1 B:ARG70 3.4 31.9 1.0
NH1 A:ARG90 3.7 18.6 1.0
CB B:ALA69 3.7 16.9 1.0
CB B:ARG70 3.8 20.1 1.0
CA B:ALA69 3.8 16.5 1.0
CZ B:ARG70 3.8 31.1 1.0
CG B:ARG70 3.8 23.2 1.0
CZ A:ARG90 3.9 17.2 1.0
C B:ALA69 3.9 16.6 1.0
CA B:ARG70 4.0 19.2 1.0
C B:GLU68 4.2 15.8 1.0
O B:GLU68 4.2 18.4 1.0
NH2 B:ARG70 4.3 32.3 1.0
O B:HOH341 4.3 18.4 1.0
NE B:ARG70 4.4 27.9 1.0
CD B:ARG70 4.7 25.2 1.0

Reference:

G.C.Pavithra, U.A.Ramagopal. Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P21 Space Group). To Be Published.
Page generated: Fri Jul 26 21:46:54 2024

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