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Chlorine in PDB 5zs6: Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2

Protein crystallography data

The structure of Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2, PDB code: 5zs6 was solved by S.Bhandari, K.Suguna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 64.55 / 2.81
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 91.290, 91.290, 91.290, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 25

Other elements in 5zs6:

The structure of Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2 also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2 (pdb code 5zs6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2, PDB code: 5zs6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5zs6

Go back to Chlorine Binding Sites List in 5zs6
Chlorine binding site 1 out of 2 in the Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:82.0
occ:1.00
N A:LEU19 3.5 54.0 1.0
CA A:LEU19 4.9 50.5 1.0

Chlorine binding site 2 out of 2 in 5zs6

Go back to Chlorine Binding Sites List in 5zs6
Chlorine binding site 2 out of 2 in the Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M: Form-2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl206

b:83.6
occ:1.00
N A:GLU76 3.1 38.1 1.0
NH1 A:ARG75 3.6 43.7 1.0
CA A:ARG75 3.7 35.3 1.0
CD A:ARG75 3.8 31.0 1.0
C A:ARG75 3.9 40.3 1.0
O A:ASN74 4.0 39.0 1.0
CB A:GLU76 4.0 28.1 1.0
CA A:GLU76 4.1 32.0 1.0
O A:GLU76 4.2 33.8 1.0
CZ A:ARG75 4.3 40.0 1.0
NE A:ARG75 4.4 32.9 1.0
CB A:ARG75 4.5 33.1 1.0
CG A:ARG75 4.5 30.9 1.0
C A:GLU76 4.6 26.2 1.0
N A:ARG75 4.8 34.9 1.0
C A:ASN74 4.8 37.5 1.0

Reference:

S.Bhandari, S.Biswas, A.Chaudhary, S.Dutta, K.Suguna. Dodecameric Structure of A Small Heat Shock Protein From Mycobacterium Marinum M. Proteins V. 87 365 2019.
ISSN: ESSN 1097-0134
PubMed: 30632633
DOI: 10.1002/PROT.25657
Page generated: Fri Jul 26 21:47:42 2024

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