Chlorine in PDB 5zur: Achromobacter DH1F Bacterioferritin

The structure of Achromobacter DH1F Bacterioferritin, PDB code: 5zur was solved by A.Dwivedy, B.Jha, K.H.Singh, M.Ahmed, A.Ashraf, D.Kumar, B.K.Biswal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.70 / 1.95
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	158.665, 158.665, 118.061, 90.00, 90.00, 90.00
R / Rfree (%)	14.2 / 18.7

The structure of Achromobacter DH1F Bacterioferritin also contains other interesting chemical elements:

Barium	(Ba)	3 atoms
Iron	(Fe)	6 atoms

The binding sites of Chlorine atom in the Achromobacter DH1F Bacterioferritin (pdb code 5zur). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Achromobacter DH1F Bacterioferritin, PDB code: 5zur:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Achromobacter DH1F Bacterioferritin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Achromobacter DH1F Bacterioferritin within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl206 b:66.1 occ:0.25 O A:HOH507 2.6 55.2 1.0 OE1 A:GLN151 4.1 9.4 1.0 CD A:GLN151 4.2 9.6 1.0 NE2 A:GLN151 4.2 10.5 1.0 BA A:BA205 4.6 12.5 0.2 CG A:GLN151 4.9 10.1 1.0

Chlorine binding site 2 out of 3 in the Achromobacter DH1F Bacterioferritin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Achromobacter DH1F Bacterioferritin within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl205 b:66.5 occ:0.25 NE2 B:GLN151 4.2 10.5 1.0 CD B:GLN151 4.2 11.3 1.0 OE1 B:GLN151 4.3 10.4 1.0 CG B:GLN151 4.9 11.6 1.0

Chlorine binding site 3 out of 3 in the Achromobacter DH1F Bacterioferritin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Achromobacter DH1F Bacterioferritin within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl205 b:66.1 occ:0.25 O C:HOH455 3.5 62.1 1.0 OE1 C:GLN151 4.1 10.6 1.0 NE2 C:GLN151 4.1 9.7 1.0 CD C:GLN151 4.2 10.3 1.0 CG C:GLN151 4.9 10.9 1.0

A.Dwivedy, B.Jha, K.H.Singh, M.Ahmad, A.Ashraf, D.Kumar, B.K.Biswal. Serendipitous Crystallization and Structure Determination of Bacterioferritin From Achromobacter. Acta Crystallogr F Struct V. 74 558 2018BIOL Commun.
ISSN: ESSN 2053-230X
PubMed: 30198888
DOI: 10.1107/S2053230X18009809