Atomistry » Chlorine » PDB 6af5-6aq4 » 6ale
Atomistry »
  Chlorine »
    PDB 6af5-6aq4 »
      6ale »

Chlorine in PDB 6ale: A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model

Protein crystallography data

The structure of A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model, PDB code: 6ale was solved by Y.W.Nam, M.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.19 / 2.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.653, 66.913, 64.712, 90.00, 92.47, 90.00
R / Rfree (%) 18.8 / 25.5

Other elements in 6ale:

The structure of A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model (pdb code 6ale). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model, PDB code: 6ale:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6ale

Go back to Chlorine Binding Sites List in 6ale
Chlorine binding site 1 out of 2 in the A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl504

b:0.2
occ:1.00
CL1 B:1KP504 0.0 0.2 1.0
C4 B:1KP504 1.8 0.6 1.0
C3 B:1KP504 2.8 0.5 1.0
C5 B:1KP504 2.8 1.0 1.0
SD R:MET71 3.2 78.8 1.0
CL B:1KP504 3.2 0.2 1.0
CE R:MET71 3.5 80.5 1.0
CG R:MET71 3.9 72.4 1.0
CG2 R:VAL55 4.0 61.4 1.0
C2 B:1KP504 4.1 0.2 1.0
C6 B:1KP504 4.2 0.8 1.0
CD1 B:LEU480 4.3 28.5 1.0
CB B:ALA477 4.3 19.8 1.0
O B:ALA477 4.5 23.3 1.0
CA B:ALA477 4.6 24.6 1.0
CG2 B:VAL481 4.6 24.3 1.0
C1 B:1KP504 4.7 0.1 1.0
CB B:LEU480 4.7 23.2 1.0
C B:ALA477 5.0 23.1 1.0
CB R:MET71 5.0 73.5 1.0

Chlorine binding site 2 out of 2 in 6ale

Go back to Chlorine Binding Sites List in 6ale
Chlorine binding site 2 out of 2 in the A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of A V-to-F Substitution in SK2 Channels Causes CA2+ Hypersensitivity and Improves Locomotion in A C. Elegans Als Model within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl504

b:0.2
occ:1.00
CL B:1KP504 0.0 0.2 1.0
C5 B:1KP504 1.8 1.0 1.0
C4 B:1KP504 2.8 0.6 1.0
C6 B:1KP504 2.9 0.8 1.0
O R:MET51 3.0 41.9 1.0
CL1 B:1KP504 3.2 0.2 1.0
N1 B:1KP504 3.4 0.8 1.0
CG2 R:VAL55 3.4 61.4 1.0
CB R:GLU54 3.5 50.5 1.0
C R:MET51 3.8 50.7 1.0
CA R:MET51 3.9 51.3 1.0
CG R:MET51 3.9 60.5 1.0
CG R:GLU54 4.1 56.0 1.0
C3 B:1KP504 4.1 0.5 1.0
C1 B:1KP504 4.2 0.1 1.0
CB R:MET51 4.2 49.5 1.0
N R:VAL55 4.3 56.5 1.0
CZ B:PHE410 4.4 67.2 1.0
CB B:ALA477 4.4 19.8 1.0
CA R:GLU54 4.5 54.3 1.0
C R:GLU54 4.5 53.7 1.0
CB R:VAL55 4.5 61.0 1.0
C2 B:1KP504 4.7 0.2 1.0
C7 B:1KP504 4.7 0.6 1.0
CG R:MET71 4.8 72.4 1.0
N R:GLU54 4.9 50.2 1.0
CE1 B:PHE410 4.9 67.6 1.0
CA R:VAL55 5.0 61.4 1.0

Reference:

Y.W.Nam, M.Zhang. Calcium-Calmodulin Complexed with the Calmodulin Binding Domain From A Mutant Small Conductance Potassium Channel and NS309 To Be Published.
Page generated: Fri Jul 26 22:06:37 2024

Last articles

Ca in 5NMR
Ca in 5NN9
Ca in 5NM8
Ca in 5NH8
Ca in 5NL7
Ca in 5NIN
Ca in 5NGQ
Ca in 5NH5
Ca in 5NGY
Ca in 5NG1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy