Chlorine in PDB 6ay7: Cartilage Homing Cysteine-Dense-Peptides

The structure of Cartilage Homing Cysteine-Dense-Peptides, PDB code: 6ay7 was solved by M.M.Gewe, R.K.Strong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.81 / 1.77
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	27.838, 47.125, 48.538, 90.00, 90.00, 90.00
R / Rfree (%)	14 / 19.3

The structure of Cartilage Homing Cysteine-Dense-Peptides also contains other interesting chemical elements:

Fluorine

(F)

6 atoms

The binding sites of Chlorine atom in the Cartilage Homing Cysteine-Dense-Peptides (pdb code 6ay7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Cartilage Homing Cysteine-Dense-Peptides, PDB code: 6ay7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Cartilage Homing Cysteine-Dense-Peptides


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cartilage Homing Cysteine-Dense-Peptides within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl104 b:28.7 occ:1.00 N A:PHE24 3.2 10.5 1.0 O A:HOH227 3.3 12.7 1.0 NE A:ARG18 3.6 56.5 1.0 CA A:ARG23 3.6 12.3 1.0 CB A:ARG23 3.9 16.1 1.0 C A:ARG23 3.9 11.9 1.0 CD1 A:PHE24 4.1 12.7 1.0 CA A:PHE24 4.1 10.2 1.0 NH2 A:ARG18 4.2 52.2 1.0 CG A:ARG18 4.2 32.8 1.0 CZ A:ARG18 4.3 55.7 1.0 CD A:ARG18 4.3 43.5 1.0 O A:HOH201 4.3 29.9 1.0 CE1 A:PHE24 4.4 13.9 1.0 CG A:ARG23 4.5 21.1 1.0 O A:MET22 4.6 13.4 1.0 CG A:PHE24 4.8 12.0 1.0 N A:ARG23 4.9 10.7 1.0

Chlorine binding site 2 out of 2 in the Cartilage Homing Cysteine-Dense-Peptides


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cartilage Homing Cysteine-Dense-Peptides within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl103 b:11.0 occ:1.00 O B:HOH208 3.1 8.7 1.0 O B:HOH237 3.1 10.7 1.0 NH1 B:ARG18 3.2 8.0 1.0 N B:PHE24 3.3 8.2 1.0 CG B:ARG18 3.7 9.3 1.0 CA B:ARG23 3.7 9.4 1.0 CD B:ARG18 3.7 8.5 1.0 CD B:ARG23 3.7 11.7 1.0 C B:ARG23 3.9 9.0 1.0 CB B:ARG23 4.0 10.3 1.0 CD1 B:PHE24 4.2 9.9 1.0 CZ B:ARG18 4.2 8.7 1.0 CA B:PHE24 4.2 8.4 1.0 NE B:ARG18 4.4 8.1 1.0 CE1 B:PHE24 4.4 10.3 1.0 CG B:ARG23 4.5 10.2 1.0 O B:MET22 4.6 8.1 1.0 CD2 B:LEU14 4.7 12.7 1.0 NE B:ARG23 4.8 11.0 1.0 CG B:PHE24 4.9 10.6 1.0 CG B:LEU14 4.9 11.6 1.0 N B:ARG23 4.9 7.9 1.0

M.M.Gewe, M.M.Gewe, R.K.Strong. N/A N/A.