Chlorine in PDB 6bq9: 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida

Enzymatic activity of 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida

All present enzymatic activity of 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida:
5.99.1.3;

Protein crystallography data

The structure of 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida, PDB code: 6bq9 was solved by G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.35 / 2.55
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 71.494, 224.057, 115.747, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 24.7

Other elements in 6bq9:

The structure of 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida (pdb code 6bq9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida, PDB code: 6bq9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6bq9

Go back to Chlorine Binding Sites List in 6bq9
Chlorine binding site 1 out of 2 in the 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:65.9
occ:0.50
 CL A:CL502 0.0 65.9 0.5
CL A:CL502 2.8 85.6 0.5
N A:ALA184 3.0 96.9 1.0
NH2 A:ARG36 3.1 0.2 1.0
CA A:MET183 3.6 0.4 1.0
N A:THR185 3.7 79.7 1.0
C A:MET183 3.8 0.8 1.0
CD A:ARG36 3.8 0.4 1.0
CB A:ALA184 3.8 94.0 1.0
CA A:ALA184 3.9 93.8 1.0
CB A:MET183 4.0 0.1 1.0
O A:ALA37 4.1 0.8 1.0
CZ A:ARG36 4.1 0.7 1.0
CD2 A:LEU38 4.2 91.9 1.0
CB A:ARG36 4.2 0.1 1.0
NE A:ARG36 4.4 0.2 1.0
C A:ALA184 4.4 86.7 1.0
CG A:ARG36 4.5 0.8 1.0
CB A:THR185 4.6 78.5 1.0
CG A:MET183 4.7 0.9 1.0
CA A:THR185 4.8 78.1 1.0
N A:MET183 4.9 0.4 1.0
OG1 A:THR185 4.9 79.3 1.0
O A:GLY182 5.0 0.4 1.0

Chlorine binding site 2 out of 2 in 6bq9

Go back to Chlorine Binding Sites List in 6bq9
Chlorine binding site 2 out of 2 in the 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:85.6
occ:0.50
 CL A:CL502 0.0 85.6 0.5
CL A:CL502 2.8 65.9 0.5
NZ A:LYS46 3.3 0.6 1.0
O A:THR185 3.3 78.5 1.0
CB A:THR185 3.4 78.5 1.0
O A:ALA37 3.6 0.8 1.0
N A:THR185 3.8 79.7 1.0
CB A:MET183 3.8 0.1 1.0
CE A:LYS46 3.9 95.1 1.0
CA A:THR185 3.9 78.1 1.0
CG A:MET183 4.0 0.9 1.0
C A:THR185 4.0 79.1 1.0
CG2 A:THR185 4.2 75.1 1.0
CD2 A:LEU38 4.2 91.9 1.0
SD A:MET183 4.3 0.6 1.0
OG1 A:THR185 4.4 79.3 1.0
CD A:PRO39 4.4 80.2 1.0
N A:ALA184 4.4 96.9 1.0
CA A:MET183 4.5 0.4 1.0
CG2 A:THR176 4.7 80.7 1.0
C A:ALA37 4.7 98.4 1.0
CA A:LEU38 4.8 88.5 1.0
C A:MET183 4.9 0.8 1.0
C A:ALA184 4.9 86.7 1.0

Reference:

G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 2.55 Angstrom Resolution Crystal Structure of N-Terminal Fragment (Residues 1-493) of Dna Topoisomerase IV Subunit A From Pseudomonas Putida. To Be Published.
Page generated: Sat Dec 12 12:47:07 2020

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