Chlorine in PDB 6bxg: 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide.

Protein crystallography data

The structure of 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide., PDB code: 6bxg was solved by G.Minasov, L.Shuvalova, E.V.Filippova, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.82 / 1.45
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 35.579, 35.579, 118.394, 90.00, 90.00, 120.00
R / Rfree (%) 13.2 / 17.8

Other elements in 6bxg:

The structure of 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide. also contains other interesting chemical elements:

Iodine (I) 15 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide. (pdb code 6bxg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide., PDB code: 6bxg:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6bxg

Go back to Chlorine Binding Sites List in 6bxg
Chlorine binding site 1 out of 2 in the 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:45.1
occ:1.00
O A:HOH578 2.9 41.7 1.0
N A:LEU301 3.4 23.8 1.0
O A:HOH564 3.6 35.4 1.0
SE A:MSE255 3.8 36.4 0.5
CB A:LEU301 3.8 21.3 1.0
CD A:ARG300 4.0 39.3 1.0
CG A:MSE255 4.1 29.7 0.5
CA A:ARG300 4.2 25.5 1.0
CB A:MSE255 4.2 25.2 0.5
CA A:LEU301 4.2 22.1 1.0
CB A:MSE255 4.3 26.4 0.5
C A:ARG300 4.3 23.9 1.0
CE A:MSE255 4.4 35.5 0.5
CG A:MSE255 4.4 30.2 0.5
CB A:ARG300 4.6 31.1 1.0
CE A:MSE255 4.8 32.1 0.5
CG A:ARG300 5.0 34.2 1.0
O A:TRP299 5.0 27.9 1.0

Chlorine binding site 2 out of 2 in 6bxg

Go back to Chlorine Binding Sites List in 6bxg
Chlorine binding site 2 out of 2 in the 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy- Terminal Protease From Vibrio Cholerae in Complex with Peptide. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:46.9
occ:0.70
N A:GLU247 3.4 24.4 1.0
I A:IOD412 3.5 50.4 0.2
O A:HOH532 3.6 43.7 1.0
CA A:LEU246 3.8 29.4 1.0
NZ A:LYS309 4.0 40.6 1.0
C A:LEU246 4.1 26.2 1.0
CG A:LEU246 4.3 42.2 1.0
CD A:LYS309 4.4 33.1 1.0
O A:GLU247 4.4 21.1 1.0
CE A:LYS309 4.4 37.2 1.0
CB A:GLU247 4.4 30.1 1.0
CA A:GLU247 4.4 23.5 1.0
O A:SER245 4.5 32.6 1.0
CB A:LEU246 4.5 36.8 1.0
C A:GLU247 4.8 21.3 1.0
N A:LEU246 4.9 28.1 1.0

Reference:

G.Minasov, L.Shuvalova, E.V.Filippova, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.45 Angstrom Resolution Crystal Structure of Pdz Domain of Carboxy-Terminal Protease From Vibrio Cholerae in Complex with Peptide. To Be Published.
Page generated: Sat Dec 12 12:47:51 2020

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