Chlorine in PDB 6bzo: Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna

All present enzymatic activity of Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna:
2.7.7.6;

The structure of Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Zinc	(Zn)	2 atoms

The binding sites of Chlorine atom in the Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna (pdb code 6bzo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna, PDB code: 6bzo:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1201 b:81.1 occ:1.00 CL1 C:FI81201 0.0 81.1 1.0 C36 C:FI81201 1.8 81.1 1.0 H70 C:FI81201 2.7 81.1 1.0 C37 C:FI81201 2.7 81.1 1.0 C35 C:FI81201 2.8 81.1 1.0 O12 C:FI81201 3.0 81.1 1.0 O13 C:FI81201 3.1 81.1 1.0 H71 C:FI81201 3.8 81.1 1.0 C34 C:FI81201 4.0 81.1 1.0 C38 C:FI81201 4.0 81.1 1.0 NH1 D:ARG84 4.2 74.6 1.0 NZ D:LYS86 4.5 72.2 1.0 C39 C:FI81201 4.6 81.1 1.0 CZ D:ARG84 4.8 74.6 1.0 CG1 C:VAL1097 4.9 71.7 1.0

Chlorine binding site 2 out of 2 in the Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1201 b:81.1 occ:1.00 CL2 C:FI81201 0.0 81.1 1.0 C38 C:FI81201 1.8 81.1 1.0 H43 C:FI81201 2.7 81.1 1.0 C39 C:FI81201 2.8 81.1 1.0 C37 C:FI81201 2.8 81.1 1.0 H45 C:FI81201 2.8 81.1 1.0 O12 C:FI81201 3.0 81.1 1.0 C40 C:FI81201 3.1 81.1 1.0 O D:HOH1503 3.2 81.4 1.0 C41 C:FI81201 3.4 81.1 1.0 H70 C:FI81201 3.6 81.1 1.0 NZ C:LYS1101 3.8 70.2 1.0 H46 C:FI81201 3.9 81.1 1.0 H44 C:FI81201 4.0 81.1 1.0 C34 C:FI81201 4.0 81.1 1.0 C36 C:FI81201 4.1 81.1 1.0 H47 C:FI81201 4.1 81.1 1.0 C35 C:FI81201 4.6 81.1 1.0 NH2 D:ARG84 4.6 74.6 1.0

H.Boyaci, J.Chen, M.Lilic, M.Palka, R.A.Mooney, R.Landick, S.A.Darst, E.A.Campbell. Fidaxomicin Jamsmycobacterium Tuberculosisrna Polymerase Motions Needed For Initiation Via Rbpa Contacts. Elife V. 7 2018.
ISSN: ESSN 2050-084X
PubMed: 29480804
DOI: 10.7554/ELIFE.34823