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Chlorine in PDB 6c9h: Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734

Enzymatic activity of Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734

All present enzymatic activity of Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734:
2.7.11.1; 2.7.11.26; 2.7.11.27; 2.7.11.31;

Protein crystallography data

The structure of Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734, PDB code: 6c9h was solved by Y.Yan, X.E.Zhou, S.Novick, S.J.Shaw, Y.Li, Y.Hitoshi, J.S.Brunzelle, P.R.Griffin, H.E.Xu, K.Melcher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.88 / 2.65
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 124.016, 124.016, 404.180, 90.00, 90.00, 120.00
R / Rfree (%) 21.3 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734 (pdb code 6c9h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734, PDB code: 6c9h:

Chlorine binding site 1 out of 1 in 6c9h

Go back to Chlorine Binding Sites List in 6c9h
Chlorine binding site 1 out of 1 in the Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Non-Phosphorylated Amp-Activated Protein Kinase Bound to Pharmacological Activator R734 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:40.1
occ:1.00
CL1 A:R34601 0.0 40.1 1.0
C10 A:R34601 1.8 22.6 1.0
C11 A:R34601 2.7 26.1 1.0
C7 A:R34601 2.8 31.1 1.0
C2 A:R34601 3.1 21.6 1.0
C3 A:R34601 3.2 33.3 1.0
CG1 B:VAL113 3.5 29.4 1.0
CD1 B:ILE115 3.8 38.9 1.0
CZ A:PHE92 3.9 32.1 1.0
CG1 B:VAL81 4.0 20.8 1.0
C12 A:R34601 4.0 34.5 1.0
C14 A:R34601 4.1 23.4 1.0
CE2 A:PHE92 4.1 28.8 1.0
CG1 B:ILE115 4.1 33.1 1.0
C21 A:R34601 4.1 27.8 1.0
CG1 A:VAL13 4.2 51.3 1.0
CG2 B:VAL81 4.2 39.2 1.0
C4 A:R34601 4.3 33.6 1.0
CG2 B:VAL113 4.5 33.6 1.0
CB B:VAL113 4.5 34.9 1.0
C13 A:R34601 4.6 25.4 1.0
CD1 A:LEU20 4.6 24.0 1.0
CD1 A:ILE48 4.7 23.9 1.0
CB B:VAL81 4.8 29.8 1.0
C6 A:R34601 5.0 38.6 1.0

Reference:

Y.Yan, X.E.Zhou, S.J.Novick, S.J.Shaw, Y.Li, J.S.Brunzelle, Y.Hitoshi, P.R.Griffin, H.E.Xu, K.Melcher. Structures of Amp-Activated Protein Kinase Bound to Novel Pharmacological Activators in Phosphorylated, Non-Phosphorylated, and Nucleotide-Free States. J. Biol. Chem. V. 294 953 2019.
ISSN: ESSN 1083-351X
PubMed: 30478170
DOI: 10.1074/JBC.RA118.004883
Page generated: Fri Jul 26 23:23:26 2024

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