Chlorine in PDB 6caz: Crystal Structure of A Peptide Deformylase From Legionella Pneumophila

Enzymatic activity of Crystal Structure of A Peptide Deformylase From Legionella Pneumophila

All present enzymatic activity of Crystal Structure of A Peptide Deformylase From Legionella Pneumophila:
3.5.1.88;

Protein crystallography data

The structure of Crystal Structure of A Peptide Deformylase From Legionella Pneumophila, PDB code: 6caz was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.83 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.210, 50.900, 105.330, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 19.3

Other elements in 6caz:

The structure of Crystal Structure of A Peptide Deformylase From Legionella Pneumophila also contains other interesting chemical elements:

Nickel (Ni) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Peptide Deformylase From Legionella Pneumophila (pdb code 6caz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Peptide Deformylase From Legionella Pneumophila, PDB code: 6caz:

Chlorine binding site 1 out of 1 in 6caz

Go back to Chlorine Binding Sites List in 6caz
Chlorine binding site 1 out of 1 in the Crystal Structure of A Peptide Deformylase From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Peptide Deformylase From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:13.7
occ:1.00
 NI A:NI203 2.3 11.0 1.0
O A:HOH303 3.1 19.7 1.0
N A:LEU92 3.2 12.0 1.0
NE2 A:GLN51 3.3 11.6 1.0
NE2 A:HIS133 3.4 11.2 1.0
SG A:CYS91 3.8 10.4 1.0
NE2 A:HIS137 3.8 10.1 1.0
CG A:LEU92 3.8 12.8 1.0
CB A:LEU92 3.8 12.4 1.0
OE1 A:GLN51 3.9 11.4 1.0
CA A:CYS91 3.9 10.3 1.0
CD A:GLN51 4.0 11.4 1.0
CD2 A:HIS133 4.0 11.9 1.0
C A:CYS91 4.0 12.7 1.0
C8 A:MES201 4.1 16.7 1.0
CA A:LEU92 4.1 11.4 1.0
O A:HOH347 4.1 17.1 1.0
O A:GLY46 4.2 15.6 1.0
CD1 A:LEU92 4.2 15.8 1.0
CB A:CYS91 4.4 10.4 1.0
CE1 A:HIS133 4.4 11.4 1.0
O2S A:MES201 4.5 14.9 1.0
CD2 A:HIS137 4.5 10.1 1.0
O3S A:MES201 4.6 16.2 1.0
S A:MES201 4.7 15.6 1.0
N A:SER93 4.7 11.0 1.0
C5 A:MES201 4.8 16.9 1.0
CE1 A:HIS137 4.8 11.0 1.0
OE2 A:GLU134 4.9 17.9 0.7
C A:LEU92 5.0 12.2 1.0
C7 A:MES201 5.0 15.5 1.0

Reference:

T.E.Edwards, P.S.Horanyi, D.Lorimer, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Peptide Deformylase From Legionella Pneumophila To Be Published.
Page generated: Sat Dec 12 12:49:06 2020

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