Chlorine in PDB 6cmz: 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad

Enzymatic activity of 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad

All present enzymatic activity of 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad:
1.8.1.4;

Protein crystallography data

The structure of 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad, PDB code: 6cmz was solved by G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.21 / 2.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 83.565, 107.246, 105.427, 90.00, 106.09, 90.00
R / Rfree (%) 19.9 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad (pdb code 6cmz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad, PDB code: 6cmz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6cmz

Go back to Chlorine Binding Sites List in 6cmz
Chlorine binding site 1 out of 2 in the 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:64.0
occ:1.00
 O A:HOH706 3.4 50.6 1.0
NH2 B:ARG23 3.6 40.2 1.0
O A:GLY436 3.7 46.1 1.0
NH1 B:ARG23 3.7 40.9 1.0
CZ B:ARG23 4.1 40.1 1.0
C A:GLY436 4.3 41.1 1.0
CD2 A:LEU454 4.4 39.5 1.0
CA A:GLY437 4.5 40.5 1.0
N A:GLY437 4.6 40.8 1.0
OE1 B:GLU326 4.8 40.6 1.0
NE2 B:GLN338 5.0 78.8 1.0

Chlorine binding site 2 out of 2 in 6cmz

Go back to Chlorine Binding Sites List in 6cmz
Chlorine binding site 2 out of 2 in the 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl501

b:81.2
occ:1.00
 CD C:ARG455 3.4 50.7 1.0
CG C:ARG455 3.4 49.3 1.0
NE2 C:HIS459 3.7 50.6 1.0
NE C:ARG455 3.8 53.6 1.0
CE1 C:HIS459 4.2 50.5 1.0
CZ C:ARG455 4.4 55.1 1.0
NH1 C:ARG455 4.7 56.1 1.0
CD2 C:HIS459 4.8 48.4 1.0
CB C:ARG455 4.9 45.2 1.0

Reference:

G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 2.3 Angstrom Resolution Crystal Structure of Dihydrolipoamide Dehydrogenase From Burkholderia Cenocepacia in Complex with Fad and Nad. To Be Published.
Page generated: Sat Dec 12 12:50:20 2020

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