Chlorine in PDB 6dfc: Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution

The structure of Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution, PDB code: 6dfc was solved by E.N.Nikolova, R.L.Stanfield, H.J.Dyson, P.E.Wright, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.02 / 1.85
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	44.240, 184.451, 104.705, 90.00, 90.00, 90.00
R / Rfree (%)	18.7 / 20.8

The structure of Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution also contains other interesting chemical elements:

Zinc

(Zn)

3 atoms

The binding sites of Chlorine atom in the Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution (pdb code 6dfc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution, PDB code: 6dfc:

Chlorine binding site 1 out of 1 in the Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with the Specific Kaiso Binding Sequence (Kbs) with A T-to-U Substitution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl704 b:34.2 occ:0.50 O A:HOH817 3.2 37.4 1.0 N A:ARG548 3.2 36.0 1.0 NH2 A:ARG590 3.7 34.8 1.0 O A:ARG548 3.9 37.9 1.0 CA A:ARG548 4.0 32.8 1.0 CG A:GLU547 4.0 38.2 1.0 CA A:GLU547 4.1 39.3 1.0 C A:GLU547 4.1 44.2 1.0 CB A:ARG548 4.1 45.6 1.0 C A:ARG548 4.2 34.9 1.0 CZ A:ARG590 4.5 35.5 1.0 NE A:ARG590 4.5 34.7 1.0 CB A:GLU547 4.6 38.1 1.0

E.N.Nikolova, R.L.Stanfield, H.J.Dyson, P.E.Wright. A Conformational Switch at the Zinc Finger Protein Kaiso Directs Recognitions of Specific and Methylated Dna To Be Published.