Chlorine in PDB 6eca: Lactobacillus Rhamnosus Beta-Glucuronidase

Protein crystallography data

The structure of Lactobacillus Rhamnosus Beta-Glucuronidase, PDB code: 6eca was solved by K.A.Biernat, S.J.Pellock, A.P.Bhatt, M.M.Bivins, W.G.Walton, B.N.T.Tran, L.Wei, M.C.Snider, A.P.Cesmat, A.Tripathy, D.A.Erie, M.R.R.Redinbo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.50 / 2.85
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 154.800, 154.800, 241.906, 90.00, 90.00, 120.00
R / Rfree (%) 14.9 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lactobacillus Rhamnosus Beta-Glucuronidase (pdb code 6eca). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Lactobacillus Rhamnosus Beta-Glucuronidase, PDB code: 6eca:

Chlorine binding site 1 out of 1 in 6eca

Go back to Chlorine Binding Sites List in 6eca
Chlorine binding site 1 out of 1 in the Lactobacillus Rhamnosus Beta-Glucuronidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lactobacillus Rhamnosus Beta-Glucuronidase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl703

b:35.0
occ:1.00
N B:TYR127 3.3 25.3 1.0
CD2 B:TYR127 3.7 21.6 1.0
CA B:LYS126 3.8 26.4 1.0
CE B:LYS83 3.9 28.9 1.0
C B:LYS126 4.0 25.5 1.0
O B:HOH870 4.1 29.6 1.0
CB B:TYR127 4.2 24.4 1.0
O B:VAL125 4.2 25.4 1.0
CD B:LYS83 4.3 25.6 1.0
CA B:TYR127 4.3 21.1 1.0
CB B:LYS126 4.4 27.0 1.0
CG B:TYR127 4.4 25.1 1.0
CD B:LYS126 4.6 40.3 1.0
NZ B:LYS83 4.6 35.4 1.0
CE2 B:TYR127 4.7 23.1 1.0
O B:TYR127 4.7 28.6 1.0
N B:LYS126 4.8 26.6 1.0
C B:VAL125 4.9 24.8 1.0

Reference:

K.A.Biernat, S.J.Pellock, A.P.Bhatt, M.M.Bivins, W.G.Walton, B.N.T.Tran, L.Wei, M.C.Snider, A.P.Cesmat, A.Tripathy, D.A.Erie, M.R.Redinbo. Structure, Function, and Inhibition of Drug Reactivating Human Gut Microbial Beta-Glucuronidases. Sci Rep V. 9 825 2019.
ISSN: ESSN 2045-2322
PubMed: 30696850
DOI: 10.1038/S41598-018-36069-W
Page generated: Sat Dec 12 12:55:08 2020

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