Atomistry » Chlorine » PDB 6el3-6eqx » 6eqd
Atomistry »
  Chlorine »
    PDB 6el3-6eqx »
      6eqd »

Chlorine in PDB 6eqd: Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength

Enzymatic activity of Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength

All present enzymatic activity of Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength:
3.1.1.101;

Protein crystallography data

The structure of Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength, PDB code: 6eqd was solved by H.P.Austin, M.D.Allen, C.W.Johnson, G.T.Beckham, J.E.Mcgeehan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.33 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 52.556, 234.311, 164.529, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 20.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength (pdb code 6eqd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength, PDB code: 6eqd:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6eqd

Go back to Chlorine Binding Sites List in 6eqd
Chlorine binding site 1 out of 2 in the Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:60.1
occ:1.00
N B:ASN288 4.1 26.4 1.0
CA B:ALA287 4.5 28.4 1.0
O B:HOH429 4.6 42.5 1.0
O B:HOH539 4.7 37.5 1.0
ND2 B:ASN288 4.7 33.3 1.0
CB B:ALA287 4.8 31.8 1.0
C B:ALA287 4.9 27.5 1.0
CA B:ASN288 4.9 27.2 1.0

Chlorine binding site 2 out of 2 in 6eqd

Go back to Chlorine Binding Sites List in 6eqd
Chlorine binding site 2 out of 2 in the Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Polyethylene Terephthalate Degrading Hydrolase From Ideonella Sakaiensis Collected at Long Wavelength within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:63.1
occ:1.00
O C:HOH412 2.3 56.3 1.0
O C:HOH639 2.4 65.9 1.0
O C:HOH610 2.8 54.9 1.0
O C:HOH555 3.4 42.8 1.0
CE2 C:TYR32 3.8 41.4 1.0
OH C:TYR32 3.9 44.6 1.0
ND2 C:ASN264 4.0 39.9 1.0
CZ C:TYR32 4.2 42.7 1.0
CE C:LYS177 4.4 48.3 1.0
O C:HOH481 4.4 47.4 1.0
CD C:ARG153 4.5 38.0 1.0
CG C:ARG153 4.7 38.6 1.0
CD2 C:TYR32 4.8 39.7 1.0

Reference:

H.P.Austin, M.D.Allen, B.S.Donohoe, N.A.Rorrer, F.L.Kearns, R.L.Silveira, B.C.Pollard, G.Dominick, R.Duman, K.El Omari, V.Mykhaylyk, A.Wagner, W.E.Michener, A.Amore, M.S.Skaf, M.F.Crowley, A.W.Thorne, C.W.Johnson, H.L.Woodcock, J.E.Mcgeehan, G.T.Beckham. Characterization and Engineering of A Plastic-Degrading Aromatic Polyesterase. Proc. Natl. Acad. Sci. V. 115 E4350 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29666242
DOI: 10.1073/PNAS.1718804115
Page generated: Sat Jul 27 22:32:25 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy