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Chlorine in PDB 6f04: N-Acetylglucosamine-2-Epimerase

Protein crystallography data

The structure of N-Acetylglucosamine-2-Epimerase, PDB code: 6f04 was solved by M.J.Halsoer, U.Rothweiler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.88 / 1.70
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 142.423, 142.423, 52.046, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 20.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the N-Acetylglucosamine-2-Epimerase (pdb code 6f04). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the N-Acetylglucosamine-2-Epimerase, PDB code: 6f04:

Chlorine binding site 1 out of 1 in 6f04

Go back to Chlorine Binding Sites List in 6f04
Chlorine binding site 1 out of 1 in the N-Acetylglucosamine-2-Epimerase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of N-Acetylglucosamine-2-Epimerase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:15.3
occ:1.00
O A:HOH647 3.0 13.8 1.0
N A:GLY370 3.3 14.3 1.0
N A:HIS373 3.4 13.9 1.0
NH1 A:ARG58 3.5 18.5 1.0
O A:GLY370 3.5 14.7 1.0
CD2 A:HIS373 3.6 13.9 1.0
CB A:PHE372 3.6 14.9 1.0
O2 A:EDO405 3.7 26.2 1.0
CZ2 A:TRP304 3.9 14.0 1.0
C A:GLY370 3.9 16.4 1.0
CB A:HIS373 4.0 13.0 1.0
CA A:LYS369 4.0 16.0 1.0
N A:PHE372 4.0 15.7 1.0
O A:TRP368 4.1 19.2 1.0
CG A:HIS373 4.1 14.1 1.0
CA A:GLY370 4.1 13.6 1.0
CA A:PHE372 4.1 13.7 1.0
C A:LYS369 4.2 14.9 1.0
C A:PHE372 4.2 16.9 1.0
CA A:HIS373 4.3 13.8 1.0
CD2 A:PHE372 4.5 17.8 1.0
NE1 A:TRP304 4.5 13.5 1.0
CG A:PHE372 4.5 19.2 1.0
CD2 A:LEU55 4.6 14.6 1.0
CE2 A:TRP304 4.6 13.0 1.0
CZ A:ARG58 4.6 26.1 1.0
CG A:LYS369 4.6 14.1 1.0
NE2 A:HIS373 4.8 16.9 1.0
CD A:ARG58 4.8 25.5 1.0
N A:CYS371 4.8 14.7 1.0
CB A:LYS369 4.8 15.7 1.0
C A:TRP368 4.9 16.4 1.0
CH2 A:TRP304 5.0 14.2 1.0
N A:LYS369 5.0 12.7 1.0

Reference:

M.J.H.Halsor, U.Rothweiler, B.Altermark, I.L.U.Raeder. The Crystal Structure of the N-Acetylglucosamine 2-Epimerase From Nostoc Sp. KVJ10 Reveals the True Dimer. Acta Crystallogr D Struct V. 75 90 2019BIOL.
ISSN: ISSN 2059-7983
PubMed: 30644848
DOI: 10.1107/S2059798318017047
Page generated: Sat Jul 27 22:45:43 2024

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