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Chlorine in PDB 6f1k: Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate

Enzymatic activity of Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate

All present enzymatic activity of Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate:
2.4.2.30;

Protein crystallography data

The structure of Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate, PDB code: 6f1k was solved by E.Obaji, T.Haikarainen, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.98 / 2.20
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 119.270, 119.270, 73.580, 90.00, 90.00, 120.00
R / Rfree (%) 21.4 / 25

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate (pdb code 6f1k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate, PDB code: 6f1k:

Chlorine binding site 1 out of 1 in 6f1k

Go back to Chlorine Binding Sites List in 6f1k
Chlorine binding site 1 out of 1 in the Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of ARTD2/PARP2 Wgr Domain Bound to Double Strand Dna Without 5'Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl101

b:82.8
occ:1.00
O3' C:DG18 3.1 72.5 1.0
C5' C:DG19 3.1 56.0 1.0
OP1 C:DG19 3.7 76.2 1.0
C4' C:DG18 3.8 74.9 1.0
P C:DG19 3.9 71.2 1.0
C3' C:DG18 3.9 74.3 1.0
O5' C:DG19 4.0 62.2 1.0
C4' C:DG19 4.3 51.0 1.0
C5' C:DG18 4.6 79.7 1.0
O4' C:DG18 4.7 71.6 1.0
O4' C:DG19 4.8 48.9 1.0

Reference:

E.Obaji, T.Haikarainen, L.Lehtio. Structural Basis For Dna Break Recognition By ARTD2/PARP2. Nucleic Acids Res. V. 46 12154 2018.
ISSN: ESSN 1362-4962
PubMed: 30321391
DOI: 10.1093/NAR/GKY927
Page generated: Sat Jul 27 22:52:18 2024

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