Chlorine in PDB 6f9x: Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5

All present enzymatic activity of Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5:
3.2.1.17;

The structure of Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5, PDB code: 6f9x was solved by A.Camara-Artigas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.78 / 1.25
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	30.090, 56.214, 73.134, 90.00, 90.00, 90.00
R / Rfree (%)	16.5 / 19.4

The binding sites of Chlorine atom in the Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5 (pdb code 6f9x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5, PDB code: 6f9x:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl202 b:19.7 occ:1.00 H A:SER81 2.6 15.1 1.0 HB3 A:SER81 2.7 19.9 1.0 HA A:ASP66 2.7 16.9 1.0 HB2 A:CYS80 3.2 13.6 1.0 N A:SER81 3.2 12.6 1.0 H A:CYS80 3.4 13.0 1.0 CB A:SER81 3.6 16.6 1.0 O A:ASN65 3.6 13.3 1.0 CA A:ASP66 3.6 14.1 1.0 HB2 A:ASP66 3.7 16.9 1.0 N A:CYS80 3.7 10.8 1.0 CA A:SER81 3.9 13.1 1.0 HB3 A:PRO79 3.9 17.3 1.0 O A:HOH303 4.0 30.7 1.0 CB A:CYS80 4.0 11.3 1.0 CB A:ASP66 4.0 14.1 1.0 C A:CYS80 4.1 11.2 1.0 HB3 A:ASP66 4.1 16.9 1.0 CA A:CYS80 4.1 10.9 1.0 HA A:SER81 4.2 15.7 1.0 OG A:SER81 4.2 19.8 1.0 HB2 A:SER81 4.2 19.9 1.0 O A:ASP66 4.2 16.9 1.0 C A:ASP66 4.3 16.6 1.0 HG A:SER81 4.4 23.7 1.0 HB2 A:PRO79 4.4 17.3 1.0 C A:PRO79 4.4 11.7 1.0 C A:ASN65 4.5 11.8 1.0 CB A:PRO79 4.5 14.4 1.0 HA A:PRO79 4.5 16.0 1.0 O A:HOH312 4.5 34.6 1.0 N A:ASP66 4.6 12.7 1.0 HB3 A:CYS80 4.6 13.6 1.0 CA A:PRO79 4.7 13.4 1.0

Chlorine binding site 2 out of 2 in the Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Lysozyme Crystallized in Presence of 100 Mm Lithium Sulphate at pH 4.5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:27.3 occ:1.00 H A:GLY26 2.2 13.0 1.0 HG A:SER24 2.7 20.3 1.0 HA A:GLN121 2.7 18.4 1.0 HB2 A:SER24 2.8 18.3 1.0 HA3 A:GLY26 3.0 13.7 1.0 N A:GLY26 3.0 10.8 1.0 OG A:SER24 3.1 16.9 1.0 CB A:SER24 3.4 15.2 1.0 CA A:GLY26 3.5 11.4 1.0 CA A:GLN121 3.5 15.3 1.0 HG12 A:ILE124 3.6 21.6 1.0 HD11 A:ILE124 3.6 23.4 1.0 HG23 A:VAL120 3.6 20.8 1.0 HD13 A:ILE124 3.6 23.4 1.0 H A:LEU25 3.8 13.4 1.0 CB A:GLN121 3.8 16.4 1.0 O A:HOH313 3.8 37.0 1.0 N A:LEU25 3.9 11.1 1.0 CD1 A:ILE124 4.0 19.5 1.0 N A:GLN121 4.0 14.9 1.0 O A:HOH418 4.0 31.9 1.0 C A:SER24 4.1 11.9 1.0 HB3 A:LEU25 4.1 13.6 1.0 HB3 A:SER24 4.1 18.3 1.0 HA2 A:GLY26 4.1 13.7 1.0 C A:LEU25 4.2 10.2 1.0 H A:ASN27 4.2 13.3 1.0 CG1 A:ILE124 4.3 18.0 1.0 O A:VAL120 4.3 14.4 1.0 H A:GLN121 4.4 17.9 1.0 C A:VAL120 4.4 14.5 1.0 CA A:SER24 4.4 13.1 1.0 CA A:LEU25 4.5 11.2 1.0 O A:SER24 4.5 11.8 1.0 CG2 A:VAL120 4.5 17.3 1.0 C A:GLY26 4.6 10.2 1.0 HG23 A:ILE124 4.6 19.3 1.0 HG21 A:ILE124 4.7 19.3 1.0 N A:ASN27 4.7 11.1 1.0 C A:GLN121 4.7 15.0 1.0 CB A:LEU25 4.8 11.3 1.0 HG21 A:VAL120 4.8 20.8 1.0 HG13 A:ILE124 4.8 21.6 1.0 HA A:SER24 4.9 15.8 1.0 HD12 A:ILE124 4.9 23.4 1.0 O A:GLN121 4.9 14.8 1.0

M.Plaza-Garrido, M.C.Salinas-Garcia, A.Camara-Artigas. Orthorhombic Lysozyme Crystallization at Acidic pH Values Driven By Phosphate Binding. Acta Crystallogr D Struct V. 74 480 2018BIOL.
ISSN: ISSN 2059-7983
PubMed: 29717719
DOI: 10.1107/S205979831800517X