Chlorine in PDB 6fak: Human Afamin Orthorhombic Crystal Form By Controlled Hydration

Protein crystallography data

The structure of Human Afamin Orthorhombic Crystal Form By Controlled Hydration, PDB code: 6fak was solved by B.Rupp, A.Naschberger, M.W.Bowler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 78.85 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 109.773, 113.325, 48.796, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 21.9

Other elements in 6fak:

The structure of Human Afamin Orthorhombic Crystal Form By Controlled Hydration also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Afamin Orthorhombic Crystal Form By Controlled Hydration (pdb code 6fak). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Afamin Orthorhombic Crystal Form By Controlled Hydration, PDB code: 6fak:

Chlorine binding site 1 out of 1 in 6fak

Go back to Chlorine Binding Sites List in 6fak
Chlorine binding site 1 out of 1 in the Human Afamin Orthorhombic Crystal Form By Controlled Hydration


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Afamin Orthorhombic Crystal Form By Controlled Hydration within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl801

b:39.5
occ:1.00
O A:HOH944 2.8 35.3 1.0
N A:PHE151 3.1 23.3 1.0
O A:HOH988 3.1 41.3 1.0
C A:ASN149 3.3 23.4 1.0
N A:PRO150 3.5 23.1 1.0
CA A:ASN149 3.5 23.6 1.0
CB A:PHE151 3.6 24.5 1.0
CD A:PRO150 3.7 23.3 1.0
N A:VAL152 3.7 24.0 1.0
CA A:PHE151 3.7 23.8 1.0
CG2 A:VAL152 3.7 25.7 1.0
O A:ASN149 3.8 23.4 1.0
OG A:SER196 3.9 32.9 1.0
CD2 A:PHE151 3.9 25.5 1.0
C A:PHE151 4.0 24.1 1.0
CB A:ASN149 4.1 23.7 1.0
CD A:LYS200 4.2 35.1 1.0
C A:PRO150 4.2 23.0 1.0
CG A:PHE151 4.2 25.1 1.0
CG A:PRO150 4.3 23.2 1.0
CA A:PRO150 4.3 23.0 1.0
CG A:LYS200 4.5 31.0 1.0
OD1 A:ASN149 4.6 24.6 1.0
CA A:VAL152 4.6 24.0 1.0
CB A:VAL152 4.7 24.8 1.0
CE A:LYS200 4.8 43.6 1.0
NZ A:LYS200 4.8 47.8 1.0
N A:ASN149 4.8 23.6 1.0
CG A:ASN149 4.8 24.1 1.0
CB A:SER196 4.9 30.0 1.0
O A:PHE151 5.0 24.5 1.0

Reference:

B.Rupp, A.Naschberger, M.W.Bowler. Human Afamin Orthorhombic Crystal Form To Be Published.
Page generated: Sat Dec 12 12:58:22 2020

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