Chlorine in PDB 6fdk: Structure of Chlamydia Trachomatis Effector Protein CDU1 Bound to Ubiquitin

Protein crystallography data

The structure of Structure of Chlamydia Trachomatis Effector Protein CDU1 Bound to Ubiquitin, PDB code: 6fdk was solved by Y.Ramirez, C.Kisker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.22 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.815, 56.937, 60.695, 90.00, 104.86, 90.00
R / Rfree (%) 17 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Chlamydia Trachomatis Effector Protein CDU1 Bound to Ubiquitin (pdb code 6fdk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Chlamydia Trachomatis Effector Protein CDU1 Bound to Ubiquitin, PDB code: 6fdk:

Chlorine binding site 1 out of 1 in 6fdk

Go back to Chlorine Binding Sites List in 6fdk
Chlorine binding site 1 out of 1 in the Structure of Chlamydia Trachomatis Effector Protein CDU1 Bound to Ubiquitin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Chlamydia Trachomatis Effector Protein CDU1 Bound to Ubiquitin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:35.9
occ:1.00
O A:PRO183 3.1 16.5 1.0
ND1 A:HIS235 3.3 15.6 1.0
O A:LEU185 3.4 15.0 1.0
O A:HIS235 3.5 16.8 1.0
CB A:THR239 3.6 16.1 1.0
C A:LEU185 3.6 15.9 1.0
CA A:ILE186 3.7 14.9 1.0
CA A:THR239 3.7 16.3 1.0
N A:ILE186 3.8 15.0 1.0
CB A:ILE186 3.8 14.6 1.0
N A:THR239 3.9 16.5 1.0
CE1 A:HIS179 3.9 14.0 1.0
O A:GLY184 3.9 14.9 1.0
ND1 A:HIS179 3.9 15.8 1.0
OG1 A:THR239 4.0 15.0 1.0
C A:GLY184 4.0 15.5 1.0
CB A:ARG238 4.1 20.4 0.5
CB A:HIS235 4.1 14.6 1.0
CG A:HIS235 4.1 14.2 1.0
CA A:HIS235 4.1 15.7 1.0
CG A:ARG238 4.1 22.4 0.5
CB A:ARG238 4.1 21.1 0.5
CG A:ARG238 4.2 21.5 0.5
C A:HIS235 4.2 16.6 1.0
CE1 A:HIS235 4.3 16.1 1.0
C A:PRO183 4.3 17.6 1.0
CG1 A:ILE186 4.4 15.7 1.0
C A:ARG238 4.4 18.0 1.0
N A:LEU185 4.4 15.5 1.0
CA A:GLY184 4.5 15.6 1.0
CA A:LEU185 4.6 14.3 1.0
CA A:ARG238 4.8 19.9 0.5
CA A:ARG238 4.8 20.3 0.5
CG2 A:THR239 4.9 17.6 1.0
O A:ARG238 4.9 19.0 1.0
CD1 A:ILE186 4.9 16.5 1.0
N A:GLY184 4.9 16.0 1.0

Reference:

Y.A.Ramirez, T.B.Adler, E.Altmann, T.Klemm, C.Tiesmeyer, F.Sauer, S.G.Kathman, A.V.Statsyuk, C.Sotriffer, C.Kisker. Structural Basis of Substrate Recognition and Covalent Inhibition of CDU1 From Chlamydia Trachomatis. Chemmedchem V. 13 2014 2018.
ISSN: ESSN 1860-7187
PubMed: 30028574
DOI: 10.1002/CMDC.201800364
Page generated: Sat Dec 12 12:58:33 2020

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